Gene RoseRS_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2340 
Symbol 
ID5209307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2894305 
End bp2894985 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content62% 
IMG OID640595945 
Producthypothetical protein 
Protein accessionYP_001276669 
Protein GI148656464 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.290858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTC CGCCTGATCC AATACGCTGG CTATTCCTCC TCGCCGGTGT GCTCGTACTG 
GCGCTTCTGA TCATCGTGAT CGGACAGAGC GGTGCAGTCC GGCACGTCTT CAGCGCAGCA
TCACCGGACG AAGCGGCCGC AATCCTGCGT GAATTCGGGT GGTGGACGCC ACTGGTCAGT
GTGCTGCTCA TGGTGCTGCA ATCCGTGCTG GCGCCGCTCC CCGGCTCGCT GATCGCCGCT
GCCAATGGCG CGATTTATGG CATCTGGAAG GGAACGCTGC TCTCCTGGAT CGGCGGCATG
GCGGGCGGTC TGGCGACGTA TGCCCTGGGA CGCTGGTTGG ACACTGCGAT AGCGCACCGC
TGGAAAGCGA CCCGCCTGCA GCAGCGCCTT GTGGAGGTCA GCTCATCCCG TGGGTTCTGG
ATCGTCCTGA TCGCCAGAAT GACGCCAATC ATCTCACTCG ATTTCATCGG CTACCTGGCA
GGGATCGCGC GGATGCCGCT CCTCTCGTAT ACGCTCGCCA ATGCGATCGG CATGATTCCG
GGAATGCTGG CGTACACCGC AATCGGCAGT GAACTGATGC AGGGTCGTCT GCTATCGTGG
TATACCGCGC TGGCGCTGCT CGCACTGATC GCGCTCTTTT TCATCGGTCG GCATGCGGTG
CGGCGCTTAC TGGAACGTTG A
 
Protein sequence
MNTPPDPIRW LFLLAGVLVL ALLIIVIGQS GAVRHVFSAA SPDEAAAILR EFGWWTPLVS 
VLLMVLQSVL APLPGSLIAA ANGAIYGIWK GTLLSWIGGM AGGLATYALG RWLDTAIAHR
WKATRLQQRL VEVSSSRGFW IVLIARMTPI ISLDFIGYLA GIARMPLLSY TLANAIGMIP
GMLAYTAIGS ELMQGRLLSW YTALALLALI ALFFIGRHAV RRLLER