| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2307 |
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| Symbol | |
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| ID | 5209274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2849179 |
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| End bp | 2850498 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595912 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001276636 |
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| Protein GI | 148656431 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
[COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCTG GAACCAGATC GACTATCACT CTTGGATGTG TCCTGAACGA TCCGCGATTT
ACCTTCTGGT CTATTCTGCG CCATGGAATA CGGTCGCGGG CGGCAGACCA CGGGATTGCC
GTCATTGACC AGGCGGCTGG CGCCGTCGAG GCGCAGGTTG AGATGGTCGC AGATCTGCTG
CGGCGTCGGG TGCATGCGCT GATCCTGGGA CCGGCGCACG AAACACGCGC ATTTGCCCAG
CATCTCGAAC TGGCGCGCCT GGCGCGTGTG CCGGTGATCG AGGTCGATGG CGGTATTCTT
GAAGGATATG TCAGCGCAAC CGTCCGCTCC AACGAACGTC AGGGTCTGAT GCGGGTTGCC
GAGTTGCTCG TGGCGCATCT GGGTGATCGC ATGCGCATCG CCCTGATCGC TGGTCCCCGT
AATCGTCGCG CTGAGATCAT GGCAGAGGTG CTGCGGCAAT GGCCCGGTGT GCAGATTGTG
GCGCAGTCCA CCGGCGATTG GACGCGCGAC AGTGGCAGGC GTCTGGCGGA GGAGTGGCTG
CGAACAGGGC AACCGATCGA TGCCATCTTT GCCGCCAACG ATCCGATGGC GCTCGGCGTC
GTTGATGCCG TCGAAGCGCT CAACCTCACG GGCAGCATTG CGGTTGTCGG ATTTGACGGA
TTACCAGAGG CGCTTCGGGC AATCAATAGC GGCGCCATGC TGGCAACCGT CAACCAGGAT
CCGCTGTGTA TCGGGCAGCA GGCGGTTGAC ACTGCACTTC AGGCGCTGCG CAGCGAGCCG
GTTGAACGAC AGATCCTGAC ACCCGGCGAA TTGATCACCC GCGATACGGT GACCGAATCA
GCGCTTCGTG CGCTCGATCT GCTGCCCGGC ATCATGCGCG ATCTCATCGA GAGCAATGCC
GAACGGCAGC GATTGCAGGA GGAGATCATC GCTGCGCAGC GCTCGACTAT TCAGGAGTTG
TCAACGCCGA TCATCCCAAT CGACGCGCGT ACCCTCATCG TGCCGTTGAT CGGCGCTATC
GACAGTACGC GCGCGGCGCA GATGACCCAG ACTATTCTCG AAGCCATCGG CGATCAGCGC
GCCGATGATG TCATCATCGA CATTACCGGC ATCGCAGTGG TTGATACGAG TGTCGCCAAC
CACCTGGTGC AGACCGCGCA GGCCGCCAGC CTGCTCGGTG CACACGTGAC CCTGGCGGGC
ATGTCGCCGG AGGTTGCGCA GACCATTGTG CAGTTGGGGA TCAAACTGGG TCAGTTGACA
ACCTGCAGCA ACCTGCAAAC AGCGCTGGAA GTTGTGCAGC GGCGGCGCGG TCGGCGGTAA
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| Protein sequence | MTSGTRSTIT LGCVLNDPRF TFWSILRHGI RSRAADHGIA VIDQAAGAVE AQVEMVADLL
RRRVHALILG PAHETRAFAQ HLELARLARV PVIEVDGGIL EGYVSATVRS NERQGLMRVA
ELLVAHLGDR MRIALIAGPR NRRAEIMAEV LRQWPGVQIV AQSTGDWTRD SGRRLAEEWL
RTGQPIDAIF AANDPMALGV VDAVEALNLT GSIAVVGFDG LPEALRAINS GAMLATVNQD
PLCIGQQAVD TALQALRSEP VERQILTPGE LITRDTVTES ALRALDLLPG IMRDLIESNA
ERQRLQEEII AAQRSTIQEL STPIIPIDAR TLIVPLIGAI DSTRAAQMTQ TILEAIGDQR
ADDVIIDITG IAVVDTSVAN HLVQTAQAAS LLGAHVTLAG MSPEVAQTIV QLGIKLGQLT
TCSNLQTALE VVQRRRGRR
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