Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2240 |
Symbol | |
ID | 5209203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2759675 |
End bp | 2761540 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640595841 |
Product | hypothetical protein |
Protein accession | YP_001276569 |
Protein GI | 148656364 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.387852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACAA ACAGAACCCT TTCATGCGAC ATTGCCATCA TCGGCGGCGG ACTGGGCGGT GTGGCAGCAG CGCTCGCCGC CTGTGACGCT GGCGCGTCGG TCGTTCTTAC CGAAGCGACC GACTGGCTCG GCGGTCAGGC GACCAGTCAG GGCGTCAGCG CGCTCGATGA GCATCGCTAC ATCGAGACCT TCGGTGCAAC CCGCAGGTAT GCCGCGTTCC GCGAGGCGAT CCGCGATCAT TATCGCCGTC GCTACGGGAT CGCTACCATG CCCGATGGGT CGCCGCTCAA CCCCGGCGAC GCCTGGGTTT CGGCGCTCTG CTTCGAGCCG CGGGTTGGCG TATCGGTGAT CGAGACGATG CTGGCGCCCC ATGTTACAGC CGGTCGGTTG ACGATCCTGC GCAACTATGC CCCCATCTCC GCCATTGTGC CGGGTGACGC GATCACCAGT GTCACAGTGA CAGGCGCGGA TGGCGATGTG ACGATTGCGG CGCGTTTCTT TCTCGACGCT ACTGATCTCG GCGACCTGCT GCCGCTGACG GGCGCTCCAT GGGTGACGGG TGCGGAGGCG CGGAGCGATA CCGGCGAGGT TGACGCACCA GAAGAGGCGC GCCCCGGCGA GGTGCAGGGG TTCACCTTCT GCTTTGCGGT CGAATATCGT CCCGGCGAAG ACCATACGAT CCCAAAACCG GAAGGGTATG AGCGTCTACG CGACTCGCAA CCGTTCACTC TGACCCTGAC CGCTGCCGAC GGCGCGCCAC GTCCCTTCCG CGTCTTCGAG ACCGGTCCGA CCGGTCTGCC GCCATTCTGG ACGTACCGCC GCCTGCTGGC AGGACGTCTG CTCGACCCGT CGGGTACGCT GCGCGATGTG GCGATGATTA ACTGGAACGC CAATGATTAT CACCATGCCG ATCTGATTGG CGCAACGCCA GAGGAACGCA CACATATTCT GGATGAAGCC CGCCGCCTTT CGCTCTCATT CCTGTACTGG CTGCAAACCG AGGTTCCACG TGACGATGGC AGCGGCTACG GCTATCCCGG TCTGCGTCTG CTCCCCGATG TGATGGGAAC GAAGGACGGG CTATCAAAAG CGCCCTACAT TCGTGAGTCA CGGCGCATCC AGGCACTGCG GCGTGTGACC GCCAATGACA TTCTGGCAGC CGGACGCACG ACTGCCCGCG CGGCGCACTT CCCCGATTCG TGCGGCGTTG GATGGTATTT TATGGACCTG CACCCGGCAG TGGGGAACCC GCGCAGCATG TTCGCGCCGA CGCTGCCGTT CCAGATACCG CTCGGAGCGC TGATCCCGCA GCGCCCGACA AATCTGCTGG CGGCATGCAA GAATATCGGC ACGACCCATC TGTCGAATGG TTCGTACCGG CTCCACCCGG TCGAGTGGAA TATCGGCGAG GCGGCGGGCG CGCTGGCGGC GTTCTGCCTG ACGCACGCGA TGCAACCGCG GGAGGTGTGG GAAGGTCGGG AGTTGCGCAT GTTTCAGCGC CATTTGCTCG AACAGGGCAT ACCACTGGCG TGGACAGTGG ATGTTCCGCC CGAACATCCG CACTTTATCC CCACCCAAAT GCTGCTGCTG GAAGGCGCGC TGGAGGGGAA TGGACCACGC GCTGCGTCGC TCGACATCGC CCCCAACACC CCTATCGACC GCGCCGACGC GCCTGCCGTG CTCCGCGCGT TGCTGCGCGC CGCCGGATCG CCATCTGAAC CGGTGATCGA TCCGGCGTTC GATCATCAAC CGCTCAGTCG CGCAGAAGCA GCGGCAACCC TGGCGCTCGT CGGGGCGTCA ACCGCTGGCA TGAGCGACCC TCCCACCTGG AGCGATCTGT GCGAAGCTCT ACGTCCGCTC CTCTGA
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Protein sequence | MVTNRTLSCD IAIIGGGLGG VAAALAACDA GASVVLTEAT DWLGGQATSQ GVSALDEHRY IETFGATRRY AAFREAIRDH YRRRYGIATM PDGSPLNPGD AWVSALCFEP RVGVSVIETM LAPHVTAGRL TILRNYAPIS AIVPGDAITS VTVTGADGDV TIAARFFLDA TDLGDLLPLT GAPWVTGAEA RSDTGEVDAP EEARPGEVQG FTFCFAVEYR PGEDHTIPKP EGYERLRDSQ PFTLTLTAAD GAPRPFRVFE TGPTGLPPFW TYRRLLAGRL LDPSGTLRDV AMINWNANDY HHADLIGATP EERTHILDEA RRLSLSFLYW LQTEVPRDDG SGYGYPGLRL LPDVMGTKDG LSKAPYIRES RRIQALRRVT ANDILAAGRT TARAAHFPDS CGVGWYFMDL HPAVGNPRSM FAPTLPFQIP LGALIPQRPT NLLAACKNIG TTHLSNGSYR LHPVEWNIGE AAGALAAFCL THAMQPREVW EGRELRMFQR HLLEQGIPLA WTVDVPPEHP HFIPTQMLLL EGALEGNGPR AASLDIAPNT PIDRADAPAV LRALLRAAGS PSEPVIDPAF DHQPLSRAEA AATLALVGAS TAGMSDPPTW SDLCEALRPL L
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