Gene RoseRS_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2240 
Symbol 
ID5209203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2759675 
End bp2761540 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content64% 
IMG OID640595841 
Producthypothetical protein 
Protein accessionYP_001276569 
Protein GI148656364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.387852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACAA ACAGAACCCT TTCATGCGAC ATTGCCATCA TCGGCGGCGG ACTGGGCGGT 
GTGGCAGCAG CGCTCGCCGC CTGTGACGCT GGCGCGTCGG TCGTTCTTAC CGAAGCGACC
GACTGGCTCG GCGGTCAGGC GACCAGTCAG GGCGTCAGCG CGCTCGATGA GCATCGCTAC
ATCGAGACCT TCGGTGCAAC CCGCAGGTAT GCCGCGTTCC GCGAGGCGAT CCGCGATCAT
TATCGCCGTC GCTACGGGAT CGCTACCATG CCCGATGGGT CGCCGCTCAA CCCCGGCGAC
GCCTGGGTTT CGGCGCTCTG CTTCGAGCCG CGGGTTGGCG TATCGGTGAT CGAGACGATG
CTGGCGCCCC ATGTTACAGC CGGTCGGTTG ACGATCCTGC GCAACTATGC CCCCATCTCC
GCCATTGTGC CGGGTGACGC GATCACCAGT GTCACAGTGA CAGGCGCGGA TGGCGATGTG
ACGATTGCGG CGCGTTTCTT TCTCGACGCT ACTGATCTCG GCGACCTGCT GCCGCTGACG
GGCGCTCCAT GGGTGACGGG TGCGGAGGCG CGGAGCGATA CCGGCGAGGT TGACGCACCA
GAAGAGGCGC GCCCCGGCGA GGTGCAGGGG TTCACCTTCT GCTTTGCGGT CGAATATCGT
CCCGGCGAAG ACCATACGAT CCCAAAACCG GAAGGGTATG AGCGTCTACG CGACTCGCAA
CCGTTCACTC TGACCCTGAC CGCTGCCGAC GGCGCGCCAC GTCCCTTCCG CGTCTTCGAG
ACCGGTCCGA CCGGTCTGCC GCCATTCTGG ACGTACCGCC GCCTGCTGGC AGGACGTCTG
CTCGACCCGT CGGGTACGCT GCGCGATGTG GCGATGATTA ACTGGAACGC CAATGATTAT
CACCATGCCG ATCTGATTGG CGCAACGCCA GAGGAACGCA CACATATTCT GGATGAAGCC
CGCCGCCTTT CGCTCTCATT CCTGTACTGG CTGCAAACCG AGGTTCCACG TGACGATGGC
AGCGGCTACG GCTATCCCGG TCTGCGTCTG CTCCCCGATG TGATGGGAAC GAAGGACGGG
CTATCAAAAG CGCCCTACAT TCGTGAGTCA CGGCGCATCC AGGCACTGCG GCGTGTGACC
GCCAATGACA TTCTGGCAGC CGGACGCACG ACTGCCCGCG CGGCGCACTT CCCCGATTCG
TGCGGCGTTG GATGGTATTT TATGGACCTG CACCCGGCAG TGGGGAACCC GCGCAGCATG
TTCGCGCCGA CGCTGCCGTT CCAGATACCG CTCGGAGCGC TGATCCCGCA GCGCCCGACA
AATCTGCTGG CGGCATGCAA GAATATCGGC ACGACCCATC TGTCGAATGG TTCGTACCGG
CTCCACCCGG TCGAGTGGAA TATCGGCGAG GCGGCGGGCG CGCTGGCGGC GTTCTGCCTG
ACGCACGCGA TGCAACCGCG GGAGGTGTGG GAAGGTCGGG AGTTGCGCAT GTTTCAGCGC
CATTTGCTCG AACAGGGCAT ACCACTGGCG TGGACAGTGG ATGTTCCGCC CGAACATCCG
CACTTTATCC CCACCCAAAT GCTGCTGCTG GAAGGCGCGC TGGAGGGGAA TGGACCACGC
GCTGCGTCGC TCGACATCGC CCCCAACACC CCTATCGACC GCGCCGACGC GCCTGCCGTG
CTCCGCGCGT TGCTGCGCGC CGCCGGATCG CCATCTGAAC CGGTGATCGA TCCGGCGTTC
GATCATCAAC CGCTCAGTCG CGCAGAAGCA GCGGCAACCC TGGCGCTCGT CGGGGCGTCA
ACCGCTGGCA TGAGCGACCC TCCCACCTGG AGCGATCTGT GCGAAGCTCT ACGTCCGCTC
CTCTGA
 
Protein sequence
MVTNRTLSCD IAIIGGGLGG VAAALAACDA GASVVLTEAT DWLGGQATSQ GVSALDEHRY 
IETFGATRRY AAFREAIRDH YRRRYGIATM PDGSPLNPGD AWVSALCFEP RVGVSVIETM
LAPHVTAGRL TILRNYAPIS AIVPGDAITS VTVTGADGDV TIAARFFLDA TDLGDLLPLT
GAPWVTGAEA RSDTGEVDAP EEARPGEVQG FTFCFAVEYR PGEDHTIPKP EGYERLRDSQ
PFTLTLTAAD GAPRPFRVFE TGPTGLPPFW TYRRLLAGRL LDPSGTLRDV AMINWNANDY
HHADLIGATP EERTHILDEA RRLSLSFLYW LQTEVPRDDG SGYGYPGLRL LPDVMGTKDG
LSKAPYIRES RRIQALRRVT ANDILAAGRT TARAAHFPDS CGVGWYFMDL HPAVGNPRSM
FAPTLPFQIP LGALIPQRPT NLLAACKNIG TTHLSNGSYR LHPVEWNIGE AAGALAAFCL
THAMQPREVW EGRELRMFQR HLLEQGIPLA WTVDVPPEHP HFIPTQMLLL EGALEGNGPR
AASLDIAPNT PIDRADAPAV LRALLRAAGS PSEPVIDPAF DHQPLSRAEA AATLALVGAS
TAGMSDPPTW SDLCEALRPL L