| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2238 |
|---|
| Symbol | |
|---|
| ID | 5209201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2756785 |
|---|
| End bp | 2758134 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640595839 |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_001276567 |
|---|
| Protein GI | 148656362 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGGCG TATGGCGGTG TCAACGCTGG AAAGCGAGTT ATCAGCCTAT GTCTCCGCTC
GCCAGGCATA TTGTTCTCCG CGACCTGGAC ATCGAAGATA TTGCGGATTT CGAGGTCTAT
CTGCGCCATG GCGGTTATGA GGCGCTGCGC ATCGCCGTGA CCGAACGCAC TCCCGCCGAC
ATTGTTCAGA CGGTGAAGGA TTCGGGACTG CGCGGGCGTG GCGGCGCCGG GTTTCCGACG
GGGGTCAAGT GGGGGTTTCT GCCGAAAGGG GTCTATCCGC GCTACCTGCT GTGCAACTGC
GACGAAAGCG AACCCGGTAC CTTCAACAAC CATCAGATTA TTGATCGCAA TCCGCATCAG
TTGATCGAAG GGATTGCGAT CTCCGCCTAC GCAATTGAGG CGCACACGGC ATATATCTAT
ATTCGCGGCG AGTTCGCGGC AGCCGCACGG CGCCTGGAAC GCGCGATCGC GCAGGCGTAT
GAGCGCGGTT TCCTCGGCAG GAATATATTC GGCAAAGGGT ACGATCTCGA CATCTATGTG
CACCGTGGCG CAGGCGCGTA TATCTGCGGC GAAGAAACGG CGCTCATGGA GTCGCTCGAA
GGGAAGATCG GTCAACCGCG CCTGCGCCCA CCCTTCCCGG CAGTCGCTGG TCTGTACGGC
AAACCAACGA TCATCAACAA TGTCGAGACG TTGACGAATG TGCCGATGAT CGTCCGCCAC
GGCGCTGCCT GGTACCGTCA GTTCGGCACC GAAAAAAGCC CTGGCACCAA AGTCTTCTCG
ATCTCCGGTC ACGTGAAACG TCCCGGCAAT TATGAGGCGC CGTTCGGCAT ACCGCTGCGC
GAGTTGATCT TTTCGCCCGA TTATTGTCAG GGAATGCGGA GCGACCGCAA TGTCAAAATT
GTGGTGCCCG GCGGTGCGTC TGCCGGCTGG CTCACGGCGG ACGATCTTGA TGTGACGATG
GACTATGAGG CGCTGGCGGC GAAGGGGAGC ATGCTCGGCT CCGGCGGCGT GATCGTCCTC
GACGAGAGTG TCAGCGCGGT CGAGGTCGCC TATAAGATGG ACGAGTTCTT CAAGCATGAG
TCGTGCGGCA AATGTACACC CTGCCGTGAG GGAACATACT TTCTGGTGAA AGTGCTGCAC
CGGATCACGC ACGGTCATGG ACGCAAGGAA GACATTCCAT TACTGCACGA TGTTTATCAT
CAGATGGCTG GCAATTGCTT CTGTCTGCTC GGCGAAAGCG CCGTCGTGCC GATCCGCAGC
GCACTGCGCC TCTTCCCGCA CGAGTTCGAA CAGGCGATTG CGCAGGCTGG CAATGGACGC
CGCGATCTGA AGATGATGTC GGTTCACTGA
|
|---|
| Protein sequence | MLGVWRCQRW KASYQPMSPL ARHIVLRDLD IEDIADFEVY LRHGGYEALR IAVTERTPAD
IVQTVKDSGL RGRGGAGFPT GVKWGFLPKG VYPRYLLCNC DESEPGTFNN HQIIDRNPHQ
LIEGIAISAY AIEAHTAYIY IRGEFAAAAR RLERAIAQAY ERGFLGRNIF GKGYDLDIYV
HRGAGAYICG EETALMESLE GKIGQPRLRP PFPAVAGLYG KPTIINNVET LTNVPMIVRH
GAAWYRQFGT EKSPGTKVFS ISGHVKRPGN YEAPFGIPLR ELIFSPDYCQ GMRSDRNVKI
VVPGGASAGW LTADDLDVTM DYEALAAKGS MLGSGGVIVL DESVSAVEVA YKMDEFFKHE
SCGKCTPCRE GTYFLVKVLH RITHGHGRKE DIPLLHDVYH QMAGNCFCLL GESAVVPIRS
ALRLFPHEFE QAIAQAGNGR RDLKMMSVH
|
|---|
| |