Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2224 |
Symbol | |
ID | 5209187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2738592 |
End bp | 2740571 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595826 |
Product | UvrD/REP helicase |
Protein accession | YP_001276554 |
Protein GI | 148656349 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGTGT GTGATATGCG TCTCTTCGCT TCACTGAATC CCGAACAACG CACTGCGGTT GCCGCTCCGC CGGGTCCCAT TCTGGTGCGT GCTGGCGCTG GCAGCGGCAA GACCCGCGTT CTCACTCTTC GGATTGCATA TCTGATCGTG GAACACGGTG TGTCGCCATC GAATATTCTG GCGCTGACGT TCACCAACAA AGCAGCGCGT GAAATGCGCC AGCGCCTGCG TGATATGCCC GGCGTCTCGA TCCGTGGTCT GACTGCTGGC ACCTTCCACT CAGTATGCGC TTCGGTGCTG CGCGAACATA TCGCCGGGCG AATCGGCAGT TATACCGCCG ATTTCACGAT CTACGCAGAA GATGAGCAGG TGCACCTGGC GTCTGCGGCG CTTGACGCAG CACGGGAGCG TCCGCCTGCA CTTCTTGAAC CAGAGGAGTT GCTGCGTCAT ATCTCGCGCG CCAAGAGCCG TTTGCTCACG CCGCGCCTGG CAGCGCGTTT CGCGCGTGAT GACCTGGCGC GCTTCGTTGC CGGGTGTTAT CAACGCTACC AGCGCAGCCT TGAGCGCGCC AATGCGCTCG ATTTTGACGA TCTCATCCTG TTGACCCATC GACTCTTCAG TGAACATCCC GATGTGCTGG ACGCCTGTCA ATCGCGCTGG CGACACGTGT TGATCGATGA GTATCAGGAT ACCGACCCGG CGCAGCATGC ATTGGTGGAG TTGCTGACAC GTCCATCACC GGCGAACGGC GGTGTTCGAT CATTGTTCGC CGTTGGTGAT GGCATGCAGG CGATCTATGG CTTCCGCAAT GCCGATCACA CAATCATTTC GCGCTTCGAA CGAGATTTCC CCGATGCACG GGTAATCGAA CTGGCAACCA ACTATCGCAG CCGTCAACCG ATACTTGATG CTGCTTATGC GGTCATTCGT CACAGTCGAA CCGTTCAGCC AATGGCGCTG CGTGCAACGA AGCCGGAAAC TCCCCGTGGC GTCGGGTATA CGTCGCCGCT CCAGATTGTC GATGCAAAAG ATGCGCGCGA TGAAGCCGAA CGGGTGGCGC GCAGCATTGC CGATCTCCTG CGGCAGGGTC GTCGTCCGCA GGAGATTGCA GTGCTCTACC GTTCGCGCCA CATGAGCCGC GCTTTTGAGT CGGCGTTGCG CCATGCGCGT ATTCCATATG CGCTGCGCGG CGCGACTGGA TTCTTTGATC GTGCTGTGGT GCGTGATGCG CTGGCATACC TGCGTGTCAT CAATAACCCC GCCGATACCC TGAGTCTCAA CCGGATTGCC AATGTGCCGC CGCGTGGGTT GGGTGCGAAT TCGCTGGTAA CACTCTCCGC CTTTGCCGGG CAGCGCGGTT TGACCCTTGC CGATGCCCTG ATTCACCCCG AAGCGCTCGC ACTGCTGCCA TCGAAAGCCG CAGAAGGGGC GCGTCAACTG GCTGCGCTTC TCACCCGCTG GCGTCGTCTG GCGGAGAGCG CACTGTCGCC CGACCACCTG CTCGCCGATG TGCTGGAACG CACCGGCTAC CAGGCATGGC TGGAACAGCG TCTCGAACCG GAGAACGTGC CGGATGCGCG CGCGCATCTC CAGGAGTTGG CGAATGCCGC CGCCGATCAT ACGGCGCTCA ACGCCTTTCT GCAAGAGGTT GCCCTGCTCA CCAGCGCCGA TGACAACGAC GAGGAGCGTG ACCGGGTGCA GTTGTCCACC ATCCACGCGG CGAAAGGTCT GGAGTGGCCG ATTGTGTTCG TTGTGGGGCT GGAGGAAGGC GTGCTGCCGC ATGAACACAG TCTGGTCACG CCGGAAGGGG TCGATGAAGA ACGTCGGCTC TGCTATGTGG CGCTGACCCG CGCAGGAGAG CAACTCTATC TGTCGTGGGC GGCGAGCCGT GTGCGTGGCA AACTGGCGAA ACCGTCGCGG TTTCTCAACG ACATCGAGGC GTATGGACGT GAGCGCGCAA GGGTGAAGGT TGAACGTTGA
|
Protein sequence | MIVCDMRLFA SLNPEQRTAV AAPPGPILVR AGAGSGKTRV LTLRIAYLIV EHGVSPSNIL ALTFTNKAAR EMRQRLRDMP GVSIRGLTAG TFHSVCASVL REHIAGRIGS YTADFTIYAE DEQVHLASAA LDAARERPPA LLEPEELLRH ISRAKSRLLT PRLAARFARD DLARFVAGCY QRYQRSLERA NALDFDDLIL LTHRLFSEHP DVLDACQSRW RHVLIDEYQD TDPAQHALVE LLTRPSPANG GVRSLFAVGD GMQAIYGFRN ADHTIISRFE RDFPDARVIE LATNYRSRQP ILDAAYAVIR HSRTVQPMAL RATKPETPRG VGYTSPLQIV DAKDARDEAE RVARSIADLL RQGRRPQEIA VLYRSRHMSR AFESALRHAR IPYALRGATG FFDRAVVRDA LAYLRVINNP ADTLSLNRIA NVPPRGLGAN SLVTLSAFAG QRGLTLADAL IHPEALALLP SKAAEGARQL AALLTRWRRL AESALSPDHL LADVLERTGY QAWLEQRLEP ENVPDARAHL QELANAAADH TALNAFLQEV ALLTSADDND EERDRVQLST IHAAKGLEWP IVFVVGLEEG VLPHEHSLVT PEGVDEERRL CYVALTRAGE QLYLSWAASR VRGKLAKPSR FLNDIEAYGR ERARVKVER
|
| |