Gene RoseRS_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2224 
Symbol 
ID5209187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2738592 
End bp2740571 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content61% 
IMG OID640595826 
ProductUvrD/REP helicase 
Protein accessionYP_001276554 
Protein GI148656349 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGT GTGATATGCG TCTCTTCGCT TCACTGAATC CCGAACAACG CACTGCGGTT 
GCCGCTCCGC CGGGTCCCAT TCTGGTGCGT GCTGGCGCTG GCAGCGGCAA GACCCGCGTT
CTCACTCTTC GGATTGCATA TCTGATCGTG GAACACGGTG TGTCGCCATC GAATATTCTG
GCGCTGACGT TCACCAACAA AGCAGCGCGT GAAATGCGCC AGCGCCTGCG TGATATGCCC
GGCGTCTCGA TCCGTGGTCT GACTGCTGGC ACCTTCCACT CAGTATGCGC TTCGGTGCTG
CGCGAACATA TCGCCGGGCG AATCGGCAGT TATACCGCCG ATTTCACGAT CTACGCAGAA
GATGAGCAGG TGCACCTGGC GTCTGCGGCG CTTGACGCAG CACGGGAGCG TCCGCCTGCA
CTTCTTGAAC CAGAGGAGTT GCTGCGTCAT ATCTCGCGCG CCAAGAGCCG TTTGCTCACG
CCGCGCCTGG CAGCGCGTTT CGCGCGTGAT GACCTGGCGC GCTTCGTTGC CGGGTGTTAT
CAACGCTACC AGCGCAGCCT TGAGCGCGCC AATGCGCTCG ATTTTGACGA TCTCATCCTG
TTGACCCATC GACTCTTCAG TGAACATCCC GATGTGCTGG ACGCCTGTCA ATCGCGCTGG
CGACACGTGT TGATCGATGA GTATCAGGAT ACCGACCCGG CGCAGCATGC ATTGGTGGAG
TTGCTGACAC GTCCATCACC GGCGAACGGC GGTGTTCGAT CATTGTTCGC CGTTGGTGAT
GGCATGCAGG CGATCTATGG CTTCCGCAAT GCCGATCACA CAATCATTTC GCGCTTCGAA
CGAGATTTCC CCGATGCACG GGTAATCGAA CTGGCAACCA ACTATCGCAG CCGTCAACCG
ATACTTGATG CTGCTTATGC GGTCATTCGT CACAGTCGAA CCGTTCAGCC AATGGCGCTG
CGTGCAACGA AGCCGGAAAC TCCCCGTGGC GTCGGGTATA CGTCGCCGCT CCAGATTGTC
GATGCAAAAG ATGCGCGCGA TGAAGCCGAA CGGGTGGCGC GCAGCATTGC CGATCTCCTG
CGGCAGGGTC GTCGTCCGCA GGAGATTGCA GTGCTCTACC GTTCGCGCCA CATGAGCCGC
GCTTTTGAGT CGGCGTTGCG CCATGCGCGT ATTCCATATG CGCTGCGCGG CGCGACTGGA
TTCTTTGATC GTGCTGTGGT GCGTGATGCG CTGGCATACC TGCGTGTCAT CAATAACCCC
GCCGATACCC TGAGTCTCAA CCGGATTGCC AATGTGCCGC CGCGTGGGTT GGGTGCGAAT
TCGCTGGTAA CACTCTCCGC CTTTGCCGGG CAGCGCGGTT TGACCCTTGC CGATGCCCTG
ATTCACCCCG AAGCGCTCGC ACTGCTGCCA TCGAAAGCCG CAGAAGGGGC GCGTCAACTG
GCTGCGCTTC TCACCCGCTG GCGTCGTCTG GCGGAGAGCG CACTGTCGCC CGACCACCTG
CTCGCCGATG TGCTGGAACG CACCGGCTAC CAGGCATGGC TGGAACAGCG TCTCGAACCG
GAGAACGTGC CGGATGCGCG CGCGCATCTC CAGGAGTTGG CGAATGCCGC CGCCGATCAT
ACGGCGCTCA ACGCCTTTCT GCAAGAGGTT GCCCTGCTCA CCAGCGCCGA TGACAACGAC
GAGGAGCGTG ACCGGGTGCA GTTGTCCACC ATCCACGCGG CGAAAGGTCT GGAGTGGCCG
ATTGTGTTCG TTGTGGGGCT GGAGGAAGGC GTGCTGCCGC ATGAACACAG TCTGGTCACG
CCGGAAGGGG TCGATGAAGA ACGTCGGCTC TGCTATGTGG CGCTGACCCG CGCAGGAGAG
CAACTCTATC TGTCGTGGGC GGCGAGCCGT GTGCGTGGCA AACTGGCGAA ACCGTCGCGG
TTTCTCAACG ACATCGAGGC GTATGGACGT GAGCGCGCAA GGGTGAAGGT TGAACGTTGA
 
Protein sequence
MIVCDMRLFA SLNPEQRTAV AAPPGPILVR AGAGSGKTRV LTLRIAYLIV EHGVSPSNIL 
ALTFTNKAAR EMRQRLRDMP GVSIRGLTAG TFHSVCASVL REHIAGRIGS YTADFTIYAE
DEQVHLASAA LDAARERPPA LLEPEELLRH ISRAKSRLLT PRLAARFARD DLARFVAGCY
QRYQRSLERA NALDFDDLIL LTHRLFSEHP DVLDACQSRW RHVLIDEYQD TDPAQHALVE
LLTRPSPANG GVRSLFAVGD GMQAIYGFRN ADHTIISRFE RDFPDARVIE LATNYRSRQP
ILDAAYAVIR HSRTVQPMAL RATKPETPRG VGYTSPLQIV DAKDARDEAE RVARSIADLL
RQGRRPQEIA VLYRSRHMSR AFESALRHAR IPYALRGATG FFDRAVVRDA LAYLRVINNP
ADTLSLNRIA NVPPRGLGAN SLVTLSAFAG QRGLTLADAL IHPEALALLP SKAAEGARQL
AALLTRWRRL AESALSPDHL LADVLERTGY QAWLEQRLEP ENVPDARAHL QELANAAADH
TALNAFLQEV ALLTSADDND EERDRVQLST IHAAKGLEWP IVFVVGLEEG VLPHEHSLVT
PEGVDEERRL CYVALTRAGE QLYLSWAASR VRGKLAKPSR FLNDIEAYGR ERARVKVER