Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2216 |
Symbol | gidB |
ID | 5209179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2732442 |
End bp | 2733146 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595818 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_001276546 |
Protein GI | 148656341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGC TCCTGAACAC CGCACGTGCG TGGGGATTAC GCCTCGATCA GCGGCAGATT GAACAGTTTG CCCGTTACAG CGCTGAACTT CGCGCCTGGA ATACGCGCGT CAACCTGACA GCAATCACCG ACGAGGAAGG AATTGTGGCG CGCCATTTCC TTGACTCGTT GCGCTGTGCG TTGAGCTGGG GAGATGCACC GTCGAGTCTG ATCGACATCG GCAGCGGAGC GGGCTTTCCA GGATTGCCGT TGAAGATCCT GCGCCCAGAA CTGAGGGTCG CCCTTGTGGA GAGCGTTGGC AAGAAAGCCG CATTTCTGCG ACATATGATT ACTGTGCTGG ACCTGCGGGA TGTGACGGTG TTGACCGCTC GCGCTGAAAC GGTTGGGCGC GACCCGCAGC ACCGTGAGCA GTACGATGTT GTGACCGCCC GCGCTGTGGC AGAACTGGCG ACGCTTGCAG AGTATTGTTT ACCGTTATGT CGAGTTCATG GGCGTGTACT GGCGCCAAAA GGGAGCGACA TCGCTGATGA GGTAGCGCGG GCGCGCACTG CAATCGAACG ACTCGGCGGG CGGGTGATCG ATGTGGAACC GGTTACCATC CCCGGCGTCG AACCGCGAAC CCTGGTGGTC ATCGCCAAGG TTGCGCCAAC CCTCGCCGCC TATCCTCGCG CCGTCGGCGT TCCCGCCAGA CGCCCCATTC ACTAG
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Protein sequence | MDMLLNTARA WGLRLDQRQI EQFARYSAEL RAWNTRVNLT AITDEEGIVA RHFLDSLRCA LSWGDAPSSL IDIGSGAGFP GLPLKILRPE LRVALVESVG KKAAFLRHMI TVLDLRDVTV LTARAETVGR DPQHREQYDV VTARAVAELA TLAEYCLPLC RVHGRVLAPK GSDIADEVAR ARTAIERLGG RVIDVEPVTI PGVEPRTLVV IAKVAPTLAA YPRAVGVPAR RPIH
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