| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2155 |
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| Symbol | |
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| ID | 5209117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2652899 |
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| End bp | 2654560 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595756 |
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| Product | phytoene dehydrogenase-related protein |
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| Protein accession | YP_001276485 |
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| Protein GI | 148656280 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.774687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA AACGCGCAGT GGTTATCGGC GCCGGTTTTG GCGGTCTGGC GATGGGTATT
CGCCTGCAAA GCCTTGGCTT CGACACCATC ATCGTCGAGA AACTGGACGG ACCCGGGGGA
CGCGCGTATG TGAAGCGCGT CGATGGTTTT ACCTTCGATA TGGGTCCGAC AGTCATTACC
GTGCCGCACT TCATTGAGGA ACTGTTTGCG CTCGAACGCG ACGCGGCGAA CCTTGCCGCG
CCGGATTTTC CGCCAGACGT GCTTGCGCCG GGGGCGCGCG TCACACGCGG CGTCAGCAGC
GGTCCCGCTA CATCGAAATA TGTGACGCTC ACGCCAATCA TTCCTTTCTA CCGGATCTAC
TTTGATGATG GGACCTTCTT CGATTACGAC GGCGATCCCG AACACACCCG CGAGCAGATT
CGTCGGCTGG CGCCAGAAGA CCTCGAGGGG TACGAACAGT TCCATGCCGC TGCTGAGGCG
ATCTTCAAGC GCGGTTTTCT CGAACTGGGG TACACCTACT TCGGCGACCT CGGAACGATG
CTACGGGTCG TGCCCGATCT GCTGCGTCTC GATGCGGTGC GCCCGCTCTT TTCGTTCGTC
AAGCGCTACT TCCGTAATCC CAAGATGCAG CAGGTGTTCA GTTTCGAGCC GCTGCTGATC
GGGGGCAATC CATTGCAGGT TCCGGCGATC TATGCCATGA TCCACTTTGT CGAAAAGACG
TGGGGCATCC ACTTCGCGCG CGGCGGCACC GGCGCACTGG TGCAGGGTCT GGTGCGGAAG
TTCGAGGAAT TGGGCGGGGT CATGCGATAC AACAGCGAGG TGCGGCGCAT TCTTGTGACC
GATGAGCATG GTCGTGAACC GCGCGGTCTG CGCGCGCGGC GCATTGCCCG CGGCGTCGAA
CTGGCTGATG GAACCCACAT TGAAGCGGAC GTGGTCGTGT CGAACGGCGA TTATGCGATG
ACCTATCTCC GCCTGATCGA TCGCCCGCAC CGGCGGATCA ATAACGACCT GCGGGTGCGC
CTGGCGCGTC AGTCGATGTC GCTGATCGTC ATCTACTTCG GTTTCCGCGC CGATCCGCGT
GATGCGCAGT TGCGGCATCA CAATATCATC CTCGGTCCGC GCTACGAGGG GTTGCTGGAG
GATATTTTCA ATCGTAAGAC GCTGGCGGAC GATTTCTCGC AGTATCTGCA CATCCCGACG
CTCACCGATC CAGGTCTGGC GCCTCCCGGT CACCATGCGG CATACACCCT TGTGCCGGTT
CCCCACAATG GTTCTGGCTT GAACTGGTCG CAGATCGCAG AACCATTCGT GGATCGGGTG
CTGCGGTTTC TCGATGAGCG CGGCTATCTG CCGGGTCTGA TGTATCGTCT GGTGCATAAG
AGTTACATCA CGCCTGACTA TTTCGAGCGC ACGCTCAACA GCTGGCTGGG GAACGGATTT
GGCGTCGAAC CGCTGCTGAT CCAGTCAGCG TACTTCCGCC CACACAATCG GAGCGAAGAT
ATCGAACGCC TCTACCTGGT CGGTGCAAGC GTCCAACCAG GCGGCGGCAC GCCATCGGTA
ATGATGTCGG CGAAGATGAC GGCGCGGATT ATCGCGCAGG ACTATGGCAT TCCTGAGTCG
ATCATGCACC GTGCGCCGGA GTCATTGCAG GCGATACGGT AG
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| Protein sequence | MQRKRAVVIG AGFGGLAMGI RLQSLGFDTI IVEKLDGPGG RAYVKRVDGF TFDMGPTVIT
VPHFIEELFA LERDAANLAA PDFPPDVLAP GARVTRGVSS GPATSKYVTL TPIIPFYRIY
FDDGTFFDYD GDPEHTREQI RRLAPEDLEG YEQFHAAAEA IFKRGFLELG YTYFGDLGTM
LRVVPDLLRL DAVRPLFSFV KRYFRNPKMQ QVFSFEPLLI GGNPLQVPAI YAMIHFVEKT
WGIHFARGGT GALVQGLVRK FEELGGVMRY NSEVRRILVT DEHGREPRGL RARRIARGVE
LADGTHIEAD VVVSNGDYAM TYLRLIDRPH RRINNDLRVR LARQSMSLIV IYFGFRADPR
DAQLRHHNII LGPRYEGLLE DIFNRKTLAD DFSQYLHIPT LTDPGLAPPG HHAAYTLVPV
PHNGSGLNWS QIAEPFVDRV LRFLDERGYL PGLMYRLVHK SYITPDYFER TLNSWLGNGF
GVEPLLIQSA YFRPHNRSED IERLYLVGAS VQPGGGTPSV MMSAKMTARI IAQDYGIPES
IMHRAPESLQ AIR
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