Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2063 |
Symbol | |
ID | 5209025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2554466 |
End bp | 2555464 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640595667 |
Product | hypothetical protein |
Protein accession | YP_001276396 |
Protein GI | 148656191 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0829013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00107186 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAATCCCA CTGACATCCT GACAACCTTG CAGGCAGCTG GTCGTCCGCT CAGCGATCTG GTCGGTGTGC CGCAGCGCGG AATCGGGCGG CTGGCGACGG CGCGCCTGTT GGCGGATAAG GCGACGCGCG ATCAGATCGT TCTTTTCGAG CCAGCGCTGG CGCCGTTCCT GCGACGGATC GTGCGCGGTG TTGATATCCA TCCCTGGTAT TGCGAACCTT CCCGCTACCT GGTGGTGCTG CCGCCGGGAT GGAGCGCTGG AGCGGATGTG CGCGCTGAAC AGGCATGGGA ATATCTGGCG CAGCGTTGTC CGCCGCTCCA TCGTCATCTT GCGTCGGCAG CAACCCGTAA AACGTGCGAT GTGGCGTGGT GGGAATTCCC AGACTGCGAC CTGACACCCT TTGCGCAGGC GCGCATCGTC TGGCCCGCCG CCAGTGTGAC ACAACGGTAT GCGCTCACCG ATCCTGGTTG TCTGGTCGGT CCCGGCGCCT GTCACATCCC CGCGTCCCTG TTTCTGCTGG GGGTGCTGAT GAGTCGTCTG GGGTGGCTGG CAGTAACGGC GATGGGGCGG GTTGGGCGGG TCTACCGGCT GGCGCCGGAG CAGATCGGAC GTATACCAAT ACCGGAGGCG ACGGAAAACG AGCGTGCGGC GATTGAAGCG CTGGTGCAAC GGATCGTTGA CCTGACCCGC GAACGGGTTG CGCTGGAGCG CCAGTTTACC CGACGGCTGT TGAGGGATTT TGGACCTCCC GGCGCGACGC CGGGCGCGCG TCTGGAACGC TGGTGGGAAC TGGATTTTGC GGCGCTGCGC CAGGCAGTTG CAGCGCGCTT CGGCGGCGAC ATCCCGGCGC GTTTCCGAGA ACAATGGCAG GCGCAGCACG CCGACGCCAT TGTCCGGCGC GCTGCGCTCA GCGACGCCCG CGCCCTTGCC GAAGCGACGT TGAATGCGCG GGTGGCGCTG CTGTATGGGG TTGATCCGCA GGGCACAATG ATGTTGTGA
|
Protein sequence | MNPTDILTTL QAAGRPLSDL VGVPQRGIGR LATARLLADK ATRDQIVLFE PALAPFLRRI VRGVDIHPWY CEPSRYLVVL PPGWSAGADV RAEQAWEYLA QRCPPLHRHL ASAATRKTCD VAWWEFPDCD LTPFAQARIV WPAASVTQRY ALTDPGCLVG PGACHIPASL FLLGVLMSRL GWLAVTAMGR VGRVYRLAPE QIGRIPIPEA TENERAAIEA LVQRIVDLTR ERVALERQFT RRLLRDFGPP GATPGARLER WWELDFAALR QAVAARFGGD IPARFREQWQ AQHADAIVRR AALSDARALA EATLNARVAL LYGVDPQGTM ML
|
| |