Gene RoseRS_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2057 
Symbol 
ID5209019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2548030 
End bp2549544 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content60% 
IMG OID640595661 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001276390 
Protein GI148656185 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.799805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0394761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATAC GCACCCGGTT GACAGTTTCA TACGTCGGCT TTTTTGCGAT TGCGTTACTG 
GCGCTGCATG TTGGATTGTA CCTGATCGTG CGCAGCGCGC TGTTGAACAG CGTCGATAAT
GAGTTGCGCC TCGGCGTCGA AGTGCTGCGG CGAGGTTTCG CCGAGAGCAA TCAGACGCCA
TACGGCTACT TCCGTGATGA TCAGTTGCGC GCCATTCTGT TGCGCCAGCC GCCGGTGCGC
GACTTCGAAG CGACCAGTCT GTACGTCCAG TTTTTCGATA CCGACGGCGA TCTTGTCGGT
CGTTCACCGA ACATTGGCGA TGGTGAACTG GCGACGGCGC TTGCTCTCGA CCGGCAGCGC
TTTGCCAGCG TGCTCGAAGG CGGCGAGCAG ATTACGACCA TTGAACACGG GAACATTCAT
GTCCGTGAGT TAATGGCGCC ACTGTGGTTC TTCAATCCGG TCACTCGCCG CGAGGAGGTC
GTCGGCGTTC TCCAGGTCGC GCGCTCAATG GCGGAGACCC AACATGCGTT GCAACTCCTC
TTCTATGCGC TGACCTTCGG TGGTGTGATC GTCCTGCTGG CGGCAGCACG CGGCGGCGCG
TGGTTGACGC GCGCTGCATT TCGTCCGATT GACGAGATTG CTCAGACGGC GCAGAGTATT
GTGCGCGCCG AAGATCTGAG CCGGCGTATT CCAGTGCCGC CAGCCGCCGA TGAGTTACAG
CGTCTGACGA TTACAGTCAA TGATCTGCTG GCGCGGATGG AGGAACTTTT CAATACGCAG
CGTCGTTTCA TTGCCGATGT GTCCCACGAG TTGCGCACGC CGTTGACGGC GATGCAGGGC
AATCTTGAAG TGCTGGCGCG CGGCGCGGCG CGCGACCCGC AGTTGCTGAA CGAGTCGCTC
GATGATATGC GCCGTGAGGT TGCCCGGTTG ATCCGTATGG TCAATGATCT GCTTTTGCTC
GCGCGGAGCG ATGCCGGTAT TCAGATCCGT CGCGATCCTG TCGAACTCGA TACGCTGCTC
CTTGAAACGT ATCGTGAGTT GCGTCTGCTG GCGGGGCAGG TGCATCTCCG CATCGGCGAG
GAGGATCAGG CAGTGGTGAC AGGCGACCGT GATCGCATCA AACAGGCGCT GCTCAATCTT
GGCGTCAATG CCATTCAACA CACGCCGCCC GGCGGCGAAG TGACGTTGAG CCTTACAGTG
CGCGACGGGT ATGCCGTGTT GAGTGTCGCC GATACAGGAT ACGGCATTGC GCCGCAGGAT
CTGCCGCACA TCTTTGATCG TTTCTATCGT GCGGATCGTT CCCGCAGTCG CAACGGCGGC
GGAGCGGGAC TGGGATTGTC AATCGTTCGT TCAGTAGTTG AGGCGCATAG CGGGCAGGTA
CTGGTGACCA GCGAACCGGG CAGGGGAAGC GTCTTTACGA TGCTGTTGCC GCTTGCGGTT
CAACCGGATC GAACACCCCC GCTCGAGATC AACCCCGCCC CTGAAACTGC CCCCCAAACG
GTCGATGCCG CATGA
 
Protein sequence
MSIRTRLTVS YVGFFAIALL ALHVGLYLIV RSALLNSVDN ELRLGVEVLR RGFAESNQTP 
YGYFRDDQLR AILLRQPPVR DFEATSLYVQ FFDTDGDLVG RSPNIGDGEL ATALALDRQR
FASVLEGGEQ ITTIEHGNIH VRELMAPLWF FNPVTRREEV VGVLQVARSM AETQHALQLL
FYALTFGGVI VLLAAARGGA WLTRAAFRPI DEIAQTAQSI VRAEDLSRRI PVPPAADELQ
RLTITVNDLL ARMEELFNTQ RRFIADVSHE LRTPLTAMQG NLEVLARGAA RDPQLLNESL
DDMRREVARL IRMVNDLLLL ARSDAGIQIR RDPVELDTLL LETYRELRLL AGQVHLRIGE
EDQAVVTGDR DRIKQALLNL GVNAIQHTPP GGEVTLSLTV RDGYAVLSVA DTGYGIAPQD
LPHIFDRFYR ADRSRSRNGG GAGLGLSIVR SVVEAHSGQV LVTSEPGRGS VFTMLLPLAV
QPDRTPPLEI NPAPETAPQT VDAA