Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2057 |
Symbol | |
ID | 5209019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2548030 |
End bp | 2549544 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640595661 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001276390 |
Protein GI | 148656185 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.799805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0394761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATAC GCACCCGGTT GACAGTTTCA TACGTCGGCT TTTTTGCGAT TGCGTTACTG GCGCTGCATG TTGGATTGTA CCTGATCGTG CGCAGCGCGC TGTTGAACAG CGTCGATAAT GAGTTGCGCC TCGGCGTCGA AGTGCTGCGG CGAGGTTTCG CCGAGAGCAA TCAGACGCCA TACGGCTACT TCCGTGATGA TCAGTTGCGC GCCATTCTGT TGCGCCAGCC GCCGGTGCGC GACTTCGAAG CGACCAGTCT GTACGTCCAG TTTTTCGATA CCGACGGCGA TCTTGTCGGT CGTTCACCGA ACATTGGCGA TGGTGAACTG GCGACGGCGC TTGCTCTCGA CCGGCAGCGC TTTGCCAGCG TGCTCGAAGG CGGCGAGCAG ATTACGACCA TTGAACACGG GAACATTCAT GTCCGTGAGT TAATGGCGCC ACTGTGGTTC TTCAATCCGG TCACTCGCCG CGAGGAGGTC GTCGGCGTTC TCCAGGTCGC GCGCTCAATG GCGGAGACCC AACATGCGTT GCAACTCCTC TTCTATGCGC TGACCTTCGG TGGTGTGATC GTCCTGCTGG CGGCAGCACG CGGCGGCGCG TGGTTGACGC GCGCTGCATT TCGTCCGATT GACGAGATTG CTCAGACGGC GCAGAGTATT GTGCGCGCCG AAGATCTGAG CCGGCGTATT CCAGTGCCGC CAGCCGCCGA TGAGTTACAG CGTCTGACGA TTACAGTCAA TGATCTGCTG GCGCGGATGG AGGAACTTTT CAATACGCAG CGTCGTTTCA TTGCCGATGT GTCCCACGAG TTGCGCACGC CGTTGACGGC GATGCAGGGC AATCTTGAAG TGCTGGCGCG CGGCGCGGCG CGCGACCCGC AGTTGCTGAA CGAGTCGCTC GATGATATGC GCCGTGAGGT TGCCCGGTTG ATCCGTATGG TCAATGATCT GCTTTTGCTC GCGCGGAGCG ATGCCGGTAT TCAGATCCGT CGCGATCCTG TCGAACTCGA TACGCTGCTC CTTGAAACGT ATCGTGAGTT GCGTCTGCTG GCGGGGCAGG TGCATCTCCG CATCGGCGAG GAGGATCAGG CAGTGGTGAC AGGCGACCGT GATCGCATCA AACAGGCGCT GCTCAATCTT GGCGTCAATG CCATTCAACA CACGCCGCCC GGCGGCGAAG TGACGTTGAG CCTTACAGTG CGCGACGGGT ATGCCGTGTT GAGTGTCGCC GATACAGGAT ACGGCATTGC GCCGCAGGAT CTGCCGCACA TCTTTGATCG TTTCTATCGT GCGGATCGTT CCCGCAGTCG CAACGGCGGC GGAGCGGGAC TGGGATTGTC AATCGTTCGT TCAGTAGTTG AGGCGCATAG CGGGCAGGTA CTGGTGACCA GCGAACCGGG CAGGGGAAGC GTCTTTACGA TGCTGTTGCC GCTTGCGGTT CAACCGGATC GAACACCCCC GCTCGAGATC AACCCCGCCC CTGAAACTGC CCCCCAAACG GTCGATGCCG CATGA
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Protein sequence | MSIRTRLTVS YVGFFAIALL ALHVGLYLIV RSALLNSVDN ELRLGVEVLR RGFAESNQTP YGYFRDDQLR AILLRQPPVR DFEATSLYVQ FFDTDGDLVG RSPNIGDGEL ATALALDRQR FASVLEGGEQ ITTIEHGNIH VRELMAPLWF FNPVTRREEV VGVLQVARSM AETQHALQLL FYALTFGGVI VLLAAARGGA WLTRAAFRPI DEIAQTAQSI VRAEDLSRRI PVPPAADELQ RLTITVNDLL ARMEELFNTQ RRFIADVSHE LRTPLTAMQG NLEVLARGAA RDPQLLNESL DDMRREVARL IRMVNDLLLL ARSDAGIQIR RDPVELDTLL LETYRELRLL AGQVHLRIGE EDQAVVTGDR DRIKQALLNL GVNAIQHTPP GGEVTLSLTV RDGYAVLSVA DTGYGIAPQD LPHIFDRFYR ADRSRSRNGG GAGLGLSIVR SVVEAHSGQV LVTSEPGRGS VFTMLLPLAV QPDRTPPLEI NPAPETAPQT VDAA
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