Gene RoseRS_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2035 
Symbol 
ID5208997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2525062 
End bp2525967 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content59% 
IMG OID640595641 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001276370 
Protein GI148656165 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.279429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAT TCCAGCCAAT CACGACTCAT ACCGCATACA TTCCGGGCGC TAATAATCTG 
GGCATTGTTC TGACCGACGA TGGCGGCGCG ATTGCGATTG ATACCGGTCT CGACAGAGAT
ACCGGTCGTC TGGTGCGGCG CGCACTCGAT GAGGCGCAGC GCCAGCTGCG GGCGATCATC
AGCACACACC ATCACGCCGA CCATATCGGC GGCAATGAGT ATCTGGTGCG CAACCTTCCC
AATGTCGCCG TCTACGCCGC GCGTCTGGAA GCGCCCCTGA TTGAACATCC GCTCCTCGAA
CCGATCTACC TGTCGCTTGG AGCAACCCCG CCATCTGCCC TGCGCACCAA ATGGTTGATG
GCAAAGGGCG TGCCGGTTCA GCACATCATC GATGGCGACG CCATCGAGAT AGCCGGGACG
ACGCTGGAAA TCGTGGCGCT GCCGGGGCAT AGCATCGGAC AGATCGGCGT TGCCGTCGAT
GGCGTCTGTT TCGCCGCCGA TGGGTTCTTC GGTCCTGAGG TGATCTCGAA GCACGGAATC
CCGTATGCAC ACGACGTTGC TGCTCAACTT GCATCGCTGG ATCGCCTGGC AATGCGAAAA
GAACGTTTCT TTCTGCCGGG TCATGGTGCA TTGACGCCGC AGAGTGAACT GGACGCGGCG
ATCCGGATCA ATCGGCTTGC CATCGAACGT GCAATGCATG CGGTACGCGA CGCACTCTCC
GAACCCGGCG ACACATTAAC CGTCGCGCGT CGGGTGCAAC GCACATTGGG ACTGACCATC
ACAGGGTTGC CGCAGTATGC CATTTTTGTC GCAGCAGTTG CTGCCCACCT CAGCCACCTC
GAATCGACAG GTGCGGCAAC GCTGATAATG ACCGATGAAG GCGCCGTATG GCGTGGTGGG
TCATGA
 
Protein sequence
MSLFQPITTH TAYIPGANNL GIVLTDDGGA IAIDTGLDRD TGRLVRRALD EAQRQLRAII 
STHHHADHIG GNEYLVRNLP NVAVYAARLE APLIEHPLLE PIYLSLGATP PSALRTKWLM
AKGVPVQHII DGDAIEIAGT TLEIVALPGH SIGQIGVAVD GVCFAADGFF GPEVISKHGI
PYAHDVAAQL ASLDRLAMRK ERFFLPGHGA LTPQSELDAA IRINRLAIER AMHAVRDALS
EPGDTLTVAR RVQRTLGLTI TGLPQYAIFV AAVAAHLSHL ESTGAATLIM TDEGAVWRGG
S