| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2023 |
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| Symbol | |
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| ID | 5208985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2510543 |
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| End bp | 2511529 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595629 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001276358 |
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| Protein GI | 148656153 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000998915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCCAGA TTACTATCAT CGGTGTTGGT TTGATCGGCG CATCACTCGG TATGGCGCTG
CGTTCCGCTC CTGAGCGCGA GTCTCCGCTG GGCGCCATAA CGGTCACCGG TTTCGATCTC
GATCCGCGTA CACTGGCGGA GGCGCGTGGA CGTCTGGCTA TTGATCGCGA GGCGCGTACG
CTGGCAGACG CAGTGCGTGA CGCGCATCTG GTGATTGTCG CAACGCCGGT GCAGACGATC
CGTCAGGTGT TTGCCGATCT TGCGCCGCTG CTCCCCCCCG GAGCAACGGT CACCGATGTG
GCGAGCACCA AGGCGCAGGT TCTCGCCTGG GCGCGTGAAC TGTTGCCCGC AACCGTTGAT
TTCATCGGCG GGCATCCGAT GGCAGGAAGC GAAAAGTCCG GTCCTGCCGC TGCTTCGCCC
GATCTCTTCC GCAATGCTAT CTACTGTCTC GCACCGCAGG AAAACGCCCG CGAAACGGCA
GTGCGCCTGG TTGAGGCGAT GGTGGATCAG ATCGGCGCCA AACTCTACTA TATCGATCCG
GTCGAACACG ACGCTTATGT GGCCGGTGTT TCGCATCTGC CCTTCATGCT TTCGACGGCG
CTGGTGGATG TGGTGAGTCG CAGTCCCGGA TGGCGTGAGA TGGCGCCACT GGCGGCGACC
GGTTTTCGTG ATGTGACCCG TCTGGCATCG GGCAGCGCCG AGATGCATCG TGATATTTGC
CTGACCAATC GAGAAGCGCT GGCGCGCTGG CTCGATGAGA TGGCGCGTCG CCTGACGGAA
CTGCGCGATC AGGTTGCCGC AGGTGATGGC GAAGGGTTGC TGGAGTGGTT TCGCCACGCG
CAGGACGTGC GTGATCAGTG GCTGGCGGAG CGCCCTAACA TGCGCCCCGG TGAGCAGGAA
TTCAATGCGA TGATCGATAT GGCATACGAC CGACCGGGTC TCTTCGGGCG CTGGGGACCG
GGATCGCGTC AACGCAAGCA GTCATAG
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| Protein sequence | MIQITIIGVG LIGASLGMAL RSAPERESPL GAITVTGFDL DPRTLAEARG RLAIDREART
LADAVRDAHL VIVATPVQTI RQVFADLAPL LPPGATVTDV ASTKAQVLAW ARELLPATVD
FIGGHPMAGS EKSGPAAASP DLFRNAIYCL APQENARETA VRLVEAMVDQ IGAKLYYIDP
VEHDAYVAGV SHLPFMLSTA LVDVVSRSPG WREMAPLAAT GFRDVTRLAS GSAEMHRDIC
LTNREALARW LDEMARRLTE LRDQVAAGDG EGLLEWFRHA QDVRDQWLAE RPNMRPGEQE
FNAMIDMAYD RPGLFGRWGP GSRQRKQS
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