Gene RoseRS_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2022 
Symbol 
ID5208984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2509920 
End bp2510546 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content60% 
IMG OID640595628 
Producthypothetical protein 
Protein accessionYP_001276357 
Protein GI148656152 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000948143 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCTTTT CTGACTCGTC AGACGTACCG GTGACCGACG TTGCTCCTGC GCCCCGATCA 
CGGCGAGTTG TGCTGCTGCT GGCAGCGCTT GCCGGTCTCT GCTGGGCAGG CGCGCTGGCG
ATGCTGCTCT GGGGTGTGGT GGATCGGCAG CAGCCATACG ATGCGCCCGA ACGCATGGTA
TATTATATGG TAGTTGTGTC CGCCGCGCTC CTGACGTTTG TCCCGATCGA GCGTCAGTTT
CACCTGACAG GTTTGAGTGT CGAGGGTCTG CTGGGCACAG GTTTATTGCT CTATACGCTG
GCATTTGTGC CCCCGCCTGT CGAATGGTTG CTCTCGCCGC CGGATGCACC AGTCTATGCT
GTGATGGCGC TGGCTGTGTT CTGGTTCTTT TCGTCGATTG CAATGCCGCT GCTGTATGCG
TCAGGGCAAC GTATCTTCCA CCAGCGCGCG CGGCGCTATG ATCGGCGGCG TGCACGTCGT
CAGGCGTATG AGATCGGGTT GCTGGCGGCA TTGACGGTGA TACTCGCGGG TCTGCGGGCG
CTTACTCCGG TTGCGGTTGC GCTGATCGCG CTGATTATCG GTGTTGCTGA ATTGTTGTTT
CTGTCGTTTG TCGAGCCTGA GCCATGA
 
Protein sequence
MRFSDSSDVP VTDVAPAPRS RRVVLLLAAL AGLCWAGALA MLLWGVVDRQ QPYDAPERMV 
YYMVVVSAAL LTFVPIERQF HLTGLSVEGL LGTGLLLYTL AFVPPPVEWL LSPPDAPVYA
VMALAVFWFF SSIAMPLLYA SGQRIFHQRA RRYDRRRARR QAYEIGLLAA LTVILAGLRA
LTPVAVALIA LIIGVAELLF LSFVEPEP