Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2007 |
Symbol | |
ID | 5208969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2487795 |
End bp | 2489666 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640595614 |
Product | CBS domain-containing protein |
Protein accession | YP_001276343 |
Protein GI | 148656138 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.232416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00139706 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAGAGA TCGTCCGCTT CCTGCTCGAG CACCCGCCCT TCAGTCAGCT GCCCCTGCTC CAGATCCAGC GCATCGCCGG AGCGATCCAG ATCGAGTATT TCGGGCAGGG GGTGCAGATT CTGGTGCAGG GCGGCAAACC GGCGGCGTTC CTGTACATCA TCCGGCGCGG CAGCGTCGAT CTGCTGCGCG AGCGTGACGG TGTGGTGGAG TTGACCGATA CGATGAGCGA GGGGGAGTGT TTTGGCTATG TGTCGCTCAT CCAGGGCAAA CCGCCGATCA GCACGGTGCG CGCGCGCGAA GCGACCCTCT GTTACCTCCT CCCTGCTGCG TTGTTCCATC AGTTGCGCCG CGATTACCCG TCATTCGCCC AGTTTTTTGC GCGTTCGATC ACCGAGCGAC TCGAACAGGC GTTGCAGCAG CGCCACGCCA CCGCTGCGCC TGAGTTGTTC CAGACGCGGC TCCAGGACCT GATCACCGAG CCGCTGGTCG TCGTTCCCCC CAATACCACG ATCCTCGAGG CGGCGCGGCG CATGCGCGAT GCACAGGCGT CGGCGCTGAT CGTCGATCTG CCGCCATACG GCATGCTCGA TGCGGGGAGC GGCATTGTGA CCGACAGCGA CCTGCGCAAC CGGGTCGTTG CTGAAGGTCT CGATTACACC ACCCCGATTG CGCATGTGAT GAGCGCGCCA GCAATCACCG TTCCAGCCGA TAGTCTGGTG TTCGAGGGGT TGCTGAAGAT GATCGAACAT GGGGTGCGCC ATCTGGCGTT GAGTCGGGAC GGCCAGATCA TCGGCATCGT CAACTACCGC GATTTTCTGC GCCTGCAAAG CAATAATCCG CTGCTCATGC CGCAGCGCCT GGCGCTGGCG CACAGTGAAG CAGACCTGCG CGCCTACACC GAACAGGTGA CCGCAACTGT CGGCGGGTTG CTCGACGCCG GTGCGCGGGT GAGCGACATC GGGCGCGCCG TGGCGGCGGC GCACGACGCC CTGCTGGTGC ATATCATTCG TGATGCTGAA GCGGCGCTGG GTCCGCCGCC CTGCCCCTAC GCCTGGCTGG TGCTGGGAAG CGAAGGACGC TACGAGCAGA CACTGCGCAC CGATCAGGAC AATGCCTTGA TCTATGCCGA TAATGCGCCG GAAGAAGCCG AAGCCTATTT CACGGCGCTG GCGGAACGGG TTGTCGAGCA ACTGGTGCGC TGTGGCTTTC CGCGTTGCCC CGGCAATGTG ATGGCAACCA ACCCGCAGTG GCGGCAACCG CGCGCTGTCT GGCAAAACTA TTTCCGCCAG TGGATCAGCG TCCCCGACGA AGAGGCATTG TTCCGCACCG CCATCTTTTT CGATCTGCGA TCGGTTTACG GGACGCTGGA TATCGAAGCG TCGCTGCGCC CGATCATCCT GCGCGCGCGT GACAATCGCG TCTTCCTCGG GCGCCTGGCG CGCGCCGCGT TGCGGCAAAC CGCGCCGATC AATTTCTTCC GTCAACTGGT GCTGGAACGG CGCGGCGATC AACGTGGACT GATCGACCTG AAGTACCGCG GAACGGCGAT GATCGTCGAT CTGGCGCGCC TGTTCGCGCT GGAAGCCGGC GTGCCCGATA CCAACACCAT TGCCCGCCTG CGCAAGGCGG CCAATCACAG CAGCCTGGGT GAAACCAGCG CCGAAGAACT GATCGCCGCC TTCGAACTGA TCGGGCTGCT CCGCCTGCGC TGGCAGTATC AGCAACTCCG CCAGGGACTC GAACCCGGCA ATCAGGTCGA GGTCGATAAA CTCACCCCGC TTGAACGGCG TGAGTTAAAA GAAGCGCTGC GCGCCGTCGC CGTTGTGCAA CGCGCAGTTG CTGCAACCTA TCAAACCAAT ATGATCGCCT GA
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Protein sequence | MEEIVRFLLE HPPFSQLPLL QIQRIAGAIQ IEYFGQGVQI LVQGGKPAAF LYIIRRGSVD LLRERDGVVE LTDTMSEGEC FGYVSLIQGK PPISTVRARE ATLCYLLPAA LFHQLRRDYP SFAQFFARSI TERLEQALQQ RHATAAPELF QTRLQDLITE PLVVVPPNTT ILEAARRMRD AQASALIVDL PPYGMLDAGS GIVTDSDLRN RVVAEGLDYT TPIAHVMSAP AITVPADSLV FEGLLKMIEH GVRHLALSRD GQIIGIVNYR DFLRLQSNNP LLMPQRLALA HSEADLRAYT EQVTATVGGL LDAGARVSDI GRAVAAAHDA LLVHIIRDAE AALGPPPCPY AWLVLGSEGR YEQTLRTDQD NALIYADNAP EEAEAYFTAL AERVVEQLVR CGFPRCPGNV MATNPQWRQP RAVWQNYFRQ WISVPDEEAL FRTAIFFDLR SVYGTLDIEA SLRPIILRAR DNRVFLGRLA RAALRQTAPI NFFRQLVLER RGDQRGLIDL KYRGTAMIVD LARLFALEAG VPDTNTIARL RKAANHSSLG ETSAEELIAA FELIGLLRLR WQYQQLRQGL EPGNQVEVDK LTPLERRELK EALRAVAVVQ RAVAATYQTN MIA
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