| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2004 |
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| Symbol | |
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| ID | 5208966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2483934 |
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| End bp | 2485853 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595611 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_001276340 |
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| Protein GI | 148656135 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00145816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACACTCA CCCACGCGAT TGGTTCGACC AACAGCGTCG AAACCGCCGA CGTTGTTGTG
AATCCGCCGG AAGAGGCAGC ACGCATTGCG AACCTGACCG ACTATGAAGC GGTCTATCGC
CGTTCGATCG AGGATCCGCA GGGGTTTTGG GCAGAAGCAG CGCAGGCGCT GCACTGGTTC
GAGCCGTTCC ACACCGTGCT CGACGACAGC AAGGCGCCCT TCTACAAGTG GTTCGTCGGC
GGCAAGACGA ATATGGCGTA CAACGCGCTG GATCGGCATG TGCAGACCTG GCGCAAAAAC
AAGGTGGCAT TGATCTGGGA AAGTGAAGAC GGCGAAGTTC GTACCTACAC CTACTGGCAA
CTCTACCGCG ACGTCAATAA GTTCGCCAAT GTGCTCAAGT CGCTCGGCGT GCGCAAAGGA
GACCGGGTCG CCATCTACAC CGGTCGCTGC CCGGAACAGG CGATTGCGAT GCTGGCGTGC
GCCCGAATCG GCGCGGTTCA CACGGTCGTT TACGGCGGTC TTTCAACCGA AGCGTTGCGC
AGTCGGATCG ACGATGCCCA CGCGAAGGTG TTGGTCGTGG CGGATGGCAG TTTGCTGAAC
GGCAAGATCG TCAAATTGAA AGAGATCGCC GATCAGGCGG TCGAACATGC TCCTTCCATC
GAAACCTGTG TTGTTATCAG ACGCACCGGT CATCCGGTCG ATATTCGCAG CGGGCGCGAT
TACTGGTGGC ACGAACTCAT GGCGCTGCCA ATCGCAAGCG CGCGCTGTGA GAGCGAAGTC
CTCGATGCCG AAGACCCGTT CTTCATCATT TACACCTCCG GTTCCACCGG CAAACCCAAA
GGGGTGGTGC ATACGCTTGG CGGGTACATG GTCGATGTCT ACACCACACT GAAGTATGTG
CTCGACTTCA AGGAAGAAGA TACGCTCTTC TGCACATCCG ACGCTGGCTG GATCGTCGGG
CACTCGATTG TGCTGTACGG TCCGTTGATG CACGGCATCA CGACGCTGAT GTACGAAGGC
GCTCCCGCCT ACCCCTACCC GGATCGCTGG TGGCACCTGA TCGAACGCCA CGGGGTTACA
TTAATGTTCA CGGCGCCGAC CGGGGTGCGC GGATTGATGC GGTACGGCGA TGCCTGGCCC
AAACGCCGCG ATCTGAGCAC GCTGCGTCTG CTGGCGTGCG CCGGTGAACC GCTCAACCCT
GAAGCCTGGC GCTGGTTCTA TGAAGTGATC GGTCAGCGAC GATGCCCGGT GATCGATAAC
TGGTGGCAGA CTGAAACGTC GCGCCCGATG CTCTCCAACT TTGCCTGTCT GCCGATGAAA
CCTGGCTCGT GCGGTTTCCC GGCGCCGGGT GTTGCAATTG ATGTTGTTGA TGAGCAGGGG
CAGAGCGTGC CGCCGGGGGT CGAGGGATCA CTGGTCATTA CCCGCCCGTG GCCCGCGATG
CTGCGCACCA TCTATGGCGA CGACCAGCGC TATATCGAGC AGTACTGGAG CCGCTATCCG
GGCATGTATC TCACCGGCGA CGCGGCAAAA CGCGATGCCG ACGGGTATAT CTGGATCATC
GGGCGCACCG ACGATGTGAT CAAAGTCTCC GGGTATCGCC TGGGCACCGC CGAAGTCGAA
AGCGCGCTCG TGTCGCATCC GGCGGTGGCG GAGGCCGCTG TGATTGGCTT GCCGCATCCG
GTGCGCGGCA ATGCGATCCA CGCCTTCGTC CTGCTCCGCG CCGGTCATTC GCCGTCGGAA
GAACTCGCCA ACGAACTGAA AGCGCACGTT GGCAAGGTGA TGGGACCGAT TGCCAAGCCG
GAAACGATCT CCTTCCCGCC CACACTGCCC AAGACGCGCT CAGGAAAGAT CATGCGTCGT
GTGCTGCGCG CCCAGGCGCT CGGTGAGCCG CTTGGCGACC TCAGCACTAT GGAAGGCTAA
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| Protein sequence | MTLTHAIGST NSVETADVVV NPPEEAARIA NLTDYEAVYR RSIEDPQGFW AEAAQALHWF
EPFHTVLDDS KAPFYKWFVG GKTNMAYNAL DRHVQTWRKN KVALIWESED GEVRTYTYWQ
LYRDVNKFAN VLKSLGVRKG DRVAIYTGRC PEQAIAMLAC ARIGAVHTVV YGGLSTEALR
SRIDDAHAKV LVVADGSLLN GKIVKLKEIA DQAVEHAPSI ETCVVIRRTG HPVDIRSGRD
YWWHELMALP IASARCESEV LDAEDPFFII YTSGSTGKPK GVVHTLGGYM VDVYTTLKYV
LDFKEEDTLF CTSDAGWIVG HSIVLYGPLM HGITTLMYEG APAYPYPDRW WHLIERHGVT
LMFTAPTGVR GLMRYGDAWP KRRDLSTLRL LACAGEPLNP EAWRWFYEVI GQRRCPVIDN
WWQTETSRPM LSNFACLPMK PGSCGFPAPG VAIDVVDEQG QSVPPGVEGS LVITRPWPAM
LRTIYGDDQR YIEQYWSRYP GMYLTGDAAK RDADGYIWII GRTDDVIKVS GYRLGTAEVE
SALVSHPAVA EAAVIGLPHP VRGNAIHAFV LLRAGHSPSE ELANELKAHV GKVMGPIAKP
ETISFPPTLP KTRSGKIMRR VLRAQALGEP LGDLSTMEG
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