| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1975 |
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| Symbol | |
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| ID | 5208937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2455985 |
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| End bp | 2456554 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640595583 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_001276312 |
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| Protein GI | 148656107 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0387] Ca2+/H+ antiporter |
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| TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00510544 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.677421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTC TGCGTTACAT GCTGATCTTC GTGCCCATTG CGTTTCTGGC AGAATGGTTC
TTCCCCAACC CGCTGCTCGT CTTTGCCCTT TCCTGTATCG CCCTGATCCC GCTCGCCGGT
CTGCTCGGCG AGGCGACCGA AGAACTCGCC ATCCACGTCG GTCCGAAAGT CGGCGGGTTG
CTGAACGCCA CCCTGGGCAA TGCCGCCGAA CTGATCATCA CGATCGTCGC GCTGCGCGAA
GGAAAGATCG AACTGGTCAA AGCATCGATC ACCGGCTCGA TTCTGGGCAA CCTGCTGCTT
ATCCTCGGTC TCAGCCTGCT GCTCGGCGGT CTGCGTCACG GCATTCAAAC GTTTGATCGC
AATCTGACCG GCGTCGCGGC GACGATGATG ATGCTCTCGG TTGTTGGTAT GATGATCCCA
ACGCTCTTTG AGTTACTTCG CGACGTGCAG AGCAGGAAGT CGGTCGATGG CGAGAGCAAC
TGGCTCGAAG GCGTGCAGTT GCTGGCCGTG TATCTGATCA CCGGTCTCGG ATTCTTTTTT
GTGGTGACGC CGGGCGCCCA TGGCGGCTGA
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| Protein sequence | MNILRYMLIF VPIAFLAEWF FPNPLLVFAL SCIALIPLAG LLGEATEELA IHVGPKVGGL
LNATLGNAAE LIITIVALRE GKIELVKASI TGSILGNLLL ILGLSLLLGG LRHGIQTFDR
NLTGVAATMM MLSVVGMMIP TLFELLRDVQ SRKSVDGESN WLEGVQLLAV YLITGLGFFF
VVTPGAHGG
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