| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1967 |
|---|
| Symbol | |
|---|
| ID | 5208929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2448323 |
|---|
| End bp | 2448865 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640595575 |
|---|
| Product | acetolactate synthase, small subunit |
|---|
| Protein accession | YP_001276304 |
|---|
| Protein GI | 148656099 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
|---|
| TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0478269 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC ATACCATCGT CGCACTTGTG CAGGACCGCC CTGGCGTGCT GAGTCGGGTG
GTCGGTCTCA TCCGACGGCG CGGATACAAT ATCGAAAGTC TGGCTGTCGG TCACAGCGAA
ACTCCCGGTG TCAGTCGGAT GACGATCGTA GTGGAATGGG AGGATGTCGA ACAGGTGGTC
AAACAACTCT ACCGCCTGAT CGAAGTATTG AAGGTGAGTG ATGTCACCAA CGACCCAACC
GTCGAACGCG AAATGGCGCT GATGAAACTG CATGCGCCGC CGGCAAAACG CCCGGAGATC
GTCGCCCTTA CCGAAGTGTT CGACGCCAAG ATCGTCGATG TCGGCGCCAA TACCATGGTG
ATCGAGATGA CCGGTTCGCC ATCCAAGGTG CAAAACTTCA TCGATGTGAT CCGTCCCTAT
GGAATCCGCG AGATGATGCG CACCGGACGA ATTGCGATGG TGCGCGGCGC ACGCGGGCAT
AATGCGGAAG AGTATGTCGA GAACGCCAAT GGGCATGCCG AGCGCGTGCC GGTGATGAAC
TAG
|
|---|
| Protein sequence | MKKHTIVALV QDRPGVLSRV VGLIRRRGYN IESLAVGHSE TPGVSRMTIV VEWEDVEQVV
KQLYRLIEVL KVSDVTNDPT VEREMALMKL HAPPAKRPEI VALTEVFDAK IVDVGANTMV
IEMTGSPSKV QNFIDVIRPY GIREMMRTGR IAMVRGARGH NAEEYVENAN GHAERVPVMN
|
|---|
| |