| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1961 |
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| Symbol | |
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| ID | 5208923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2440366 |
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| End bp | 2441790 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595569 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001276298 |
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| Protein GI | 148656093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTC GCACGCTGTT TGATAAAGTC TGGGATGCCC ATATCGTTCG ACCGCAGACG
GCGGAAACCC CTGCAGTGAT CTACATCGAT CTGCATCTCA TTCACGAAGT CACATCGCCG
CAGGCGTTCA CCGAACTGCG GCAGCGCGGT CTGAAGGTGC GCCGACCGGA TCGTACCCTG
GCGACGATGG ATCATTCGAC GCCAACCACG CCACGCGGCG CCGACGGGAT CATCCCGGTC
GTCGATGCGC AGGCGGCAGC GCAACTCCGC CAACTCGAGC AAAATTGCGC TGAGTTCGGC
ATCCCGCTCT TTGCACTGGG AAGCGAATAC CAGGGCATCG TTCACGTCAT CGGTCCTGAA
CAGGGGCTGA CGCAGCCGGG CATGACCATT GTCTGCGGCG ACAGCCACAC CAGTACGCAT
GGCGCATTCG GCGCACTGGC GTTTGGCATC GGCACGTCCG AGGTCGCCCA TGTGCTGGCG
ACGCAGTGCC TGATCCAGAC CCGCCCCAAA ACCATGGAAG TGCGCGTTGA TGGGCGACTG
GCGCCGGGCG TGACGGCCAA AGACATCATC CTGGCGATCA TCGCGCGCTA CGGCGTCGGC
GCCGGTACCG GACACGTCTT CGAGTACACC GGCGAAACCA TCCGGGCGCT GTCAATGGAA
GAACGCATGA CGATCTGCAA CATGTCGATT GAAGGCGGTG CGCGCGCTGG TATGATCGCC
CCCGATGACA CTACATTCGA ATATATTGCT GGACGACCGT TTGCGCCAAA AGGGAAAGCC
TGGGACGAAG CTGTAGCGTA CTGGCGCACC CTCCCCACCG ACGAGGGTGC AGTCTATGAC
CGGATCATCA CGCTCGACGC ATCGCAACTG ACACCGATGA TCACTTACGG CACAAACCCT
GGTATGGGCA TGCCGATCGA CGGGCGCATT CCGACGCCGG AAGAGTTGCC TGATCCGGCG
GCGCGCCAGG CGCTCGACAA AGCGCTGCGT TACATGGACC TGCGCCCCGG ACAACCCCTC
CTCGGACACA AGATCGATGT TGTGTTCCTG GGGAGTTGCA CTAACTCGCG GATTTCAGAT
CTGCGAATGG CGGCGCGGCT TCTGAAAGGA CGCAAGATCG CCGATGGCGT GCGGATGATG
GTCGTTCCCG GATCGCAGCA GGTCAAAAAG CAGGCGGAAG CCGAAGGTCT GCACGAGATT
TTCCGCGCAG CCGGCGCCGA ATGGCGCGAA GCCGGATGCT CGGCGTGCCT GGGCATGAAC
GATGACAAAG TGCCCCCCGG CAGGTACGCC GTCTCAACGA GCAATCGCAA CTTCGAAGGG
CGCCAGGGAC CGGGAGCGCG CACCTTCCTC GCCAGTCCGC TCACTGCCGT CGCTTCTGCT
ATCGAAGGCG CGGTCGCCGA CCCGCGCAGG TATCTGGGTG GATGA
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| Protein sequence | MTPRTLFDKV WDAHIVRPQT AETPAVIYID LHLIHEVTSP QAFTELRQRG LKVRRPDRTL
ATMDHSTPTT PRGADGIIPV VDAQAAAQLR QLEQNCAEFG IPLFALGSEY QGIVHVIGPE
QGLTQPGMTI VCGDSHTSTH GAFGALAFGI GTSEVAHVLA TQCLIQTRPK TMEVRVDGRL
APGVTAKDII LAIIARYGVG AGTGHVFEYT GETIRALSME ERMTICNMSI EGGARAGMIA
PDDTTFEYIA GRPFAPKGKA WDEAVAYWRT LPTDEGAVYD RIITLDASQL TPMITYGTNP
GMGMPIDGRI PTPEELPDPA ARQALDKALR YMDLRPGQPL LGHKIDVVFL GSCTNSRISD
LRMAARLLKG RKIADGVRMM VVPGSQQVKK QAEAEGLHEI FRAAGAEWRE AGCSACLGMN
DDKVPPGRYA VSTSNRNFEG RQGPGARTFL ASPLTAVASA IEGAVADPRR YLGG
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