| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1946 |
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| Symbol | |
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| ID | 5208908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2410424 |
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| End bp | 2411245 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640595555 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001276284 |
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| Protein GI | 148656079 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAGT TACCCGAAGT TCAACTTGCT GCCGATAGCC TGGGAGTGCA GATCGTCGGT
GCGCGGATCG TGCGTGTGGA ACGGCTCGAC TGGACCCGCA TGGTCGAGAC CCCCTCGCCC
GATGAGTTCA TCACGCTGCT CGCCGGTCGT CAGGTGCATG GGTGGGGGCG TCGCGCCAAG
TGGATTCTGC TCTTTCTTGA TGGCGGCTGG ACGCTGGCGT TGCACCTGCG CATGTCCGGC
AGTCTGACGG TCCAACCTGC GGACGCACCT CCCGATAAGC ACACGCACCT GGTGCTCCGC
CTCGATGATG GTCGCCAGGT TTTCTTCCGC GACCCGCGCA AGTTCGGGCG TGCACGATTG
CTGGATGCGG ATGGTCGGGC GGCGCTCGAT GCGGCGCACG GCGATGAGCC GCTATCCAAC
GCATTCACCG TCGAGCGCCT GGCGGAGCTG CTGCGCGGGC GGAAACGGGC GATCAAGCCG
CTGTTGCTGG ACCAGGCGGT GATTGCGGGA ATTGGCAACA TTTACGCCGA TGAAGCGCTG
TGGCGCGCCC GCATCCATCC ATTGCGCCCG GCATCCGACC TGAGCGCCGA CGAAGTTGCG
GCGCTCCACG ATGGCATTCG CGCGGCGCTG CGGCAGGCGC TGACCAACGG CGGCAGCACG
TTGCGCGACT ACCGTAACTC ATACGGAACG CGCGGCACGA ACCAGGATCA CTTCAACGCC
TATGACCGTG AGGGACAACC GTGTCCGCGC TGCGGCGCAA CGATCATCAA AACGGTCGTC
GCGCAGCGCG GAACGCACTA TTGCCCGGAA TGTCAGCGGT GA
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| Protein sequence | MPELPEVQLA ADSLGVQIVG ARIVRVERLD WTRMVETPSP DEFITLLAGR QVHGWGRRAK
WILLFLDGGW TLALHLRMSG SLTVQPADAP PDKHTHLVLR LDDGRQVFFR DPRKFGRARL
LDADGRAALD AAHGDEPLSN AFTVERLAEL LRGRKRAIKP LLLDQAVIAG IGNIYADEAL
WRARIHPLRP ASDLSADEVA ALHDGIRAAL RQALTNGGST LRDYRNSYGT RGTNQDHFNA
YDREGQPCPR CGATIIKTVV AQRGTHYCPE CQR
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