| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1921 |
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| Symbol | |
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| ID | 5208882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2386453 |
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| End bp | 2387256 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595530 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001276260 |
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| Protein GI | 148656055 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.613535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00318015 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATACCGC GAGCATTGAC GATTGCCGGT TCCGATTCGG GCGGCGGCGC CGGCATCCAG
GCAGATTTGA AAACATTTAT GGCGCATGGG GTCTACGGCG CCAGCGCGAT CACCGCTATC
ACTGCTCAAA ACACGGTCGG CGTGCATGCC GTGCTCATGC TCGAACCATC ACTCGTTGTT
GCGCAAATCG AGGCGGTGCT CGACGACATC GGCGCCGATG CGGTCAAAAC CGGCATGCTG
GGGAACGCTT CCATTATCCA GGCGGTCGCC GACACGCTGG AGCGATACCG GGTCGAGCGT
CTGGTGATCG ATCCGGTAAT GGTTGCGAAG AGTGGTGCGC GCCTGCTCGA AGAAGATGCT
ATCGCCACGC TGCGTGCGCG GCTATTGCCG CTGGCGCTGG TAGTGACGCC GAACCTGCCA
GAAGCGTCGG TGCTGTTGAA TCGCCCGGTG ACCGACGAAC GCGACATGCA GGATGCTGCG
CGCGATCTCC ACACACTCGG ACCACGGTAT GTGTTGCTGA AGGGAGGGCA CCTGTCGGGG
AGCGATGTCG TCGATCTGCT GTACGACGGC GAGCGTTTTG TCACACTGCG CGCACCGCGC
CTGGAAACGA ACCATACCCA CGGCACCGGT TGCACCTACG CTGCTGCCAT TGCCGCACTG
ATCGCGCGCG GTCTACCGGT CGAACAGGCG GTTCGTCAGG CGCACGCTTA TCTCCAAGAT
GCCATCGTCC ACGCGCCAGC GATCGGCAAA GGATACGGAC CGGTCAACCA TCTGGTGTAC
GGATTGCCCG TCAGTCGCGG GTAA
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| Protein sequence | MIPRALTIAG SDSGGGAGIQ ADLKTFMAHG VYGASAITAI TAQNTVGVHA VLMLEPSLVV
AQIEAVLDDI GADAVKTGML GNASIIQAVA DTLERYRVER LVIDPVMVAK SGARLLEEDA
IATLRARLLP LALVVTPNLP EASVLLNRPV TDERDMQDAA RDLHTLGPRY VLLKGGHLSG
SDVVDLLYDG ERFVTLRAPR LETNHTHGTG CTYAAAIAAL IARGLPVEQA VRQAHAYLQD
AIVHAPAIGK GYGPVNHLVY GLPVSRG
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