Gene RoseRS_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1877 
Symbol 
ID5208837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2329510 
End bp2330886 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content59% 
IMG OID640595485 
ProductATPase central domain-containing protein 
Protein accessionYP_001276216 
Protein GI148656011 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCT TTTCGCAGCA ATTCGCCGGC AAGCAGCAGG CTGCCTCACC TTCCGGCGCA 
TCCGGCAGCG TCTCTGTCCC GCCTGAACCT GCGTCAATCG AGGAAACCGG TCTCAGCATG
GGGTTTCTGA ACGACCTGGT GCTGAAGGTG GTCTACTTCC ACGGCAATAT CACCGGGCAG
CAGATTGCCG AGGTGACCAA ACTGCCGTTC TTCGGCGTGC TCGACAAGGT GCTGGAGTTC
CTCAAACTCG AAGAGTATGT CGATATTGTC GGTGCGCAGG GCGGGTTCAA CGAACGCTCC
TTCCAGTATG TCATCGCCAC CAAAGGGCGC CTGAAAGTCC ACGAAGTGCT GGATCGATCC
CAGTACGCCG GACCTGCCCC CGTGCCGCTT GATCAGTATA TCGCCATGGT GCATCGCCAG
TCGGTCGGCG ATATGGTGGT GGACGCCAAA ACCGTGCGCC AGGCGTTTGC CCATCTCGTC
GTCAGCGACC GCATGCTCGA CCGCATCGGT CCGGCGGCAA ACTCAGCCCG TTCGCTGTTC
CTCTACGGTC CTCCCGGCAA CGGCAAAACG ACGATAGCCG AAGGGATCGC CAACATGCTT
GGCGGTCACG TCCTGATCCC ATATGCGGTC GAGGTCGATG GGCAGATCAT CAAGGTGTTC
GATCCGCTCA ATCATCAACT GATCGAGCAA CCGGCAACCG CCGCCGCCCG CGAACCGGCT
GTCAACTTCG AGGGGCGTCC GGTGGTCGAT TCGCCCCTCC CCGACCGGCG CTGGCTGGTC
TGTAAACGAC CGCGGGTAAT GGTCGGCGGC GAGTTGATCC TGGAACAGCT CGAACTGATC
TTCGATCCTA TCGCAAAAGT GTATGAAGCG CCGTACCAGA TGAAAGCCAA CGGCGGGTTG
TTCCTGATCG ACGACTTTGG TCGCCAGAAA TGCCGCCCGC AAGACCTGCT CAACCGCTGG
ATCGTGCCGC TGGAAAAGAA AGTCGATTTT CTCGCCCTTC AGACCGGCAA GAAAATCCAG
GTGCCGTTCG ATGTGCTGAT CGTCTTCTCG ACCAACCTTT CGCCGCAGGA CCTGGTCGAT
GACGCTTTCC TGCGGCGCAT CCGCCACAAG ATCGAAGTGC CGAACCCGTC GCCGGAAGAG
TTTCGCGCCA TCTTTCAGCG CGTGGCGAAA GCGAAGAATA TTCCCTACAG CGACGAAGGC
TTGCGCTATC TCATCCTGGA ACGCTACAAG CGCGACGGGC GCGACCTGCG ATCGTGCCAC
CCGCGCGACC TGTGCGACCA GATCCTGGAC GAAGCGAAAT ACCGCGGCAT ACCGCCGTCG
ATGTCGCGCG AATTGCTTGA TCGCGCCTAT GATGCGTACT TTGTGAAACT CTCATAG
 
Protein sequence
MSFFSQQFAG KQQAASPSGA SGSVSVPPEP ASIEETGLSM GFLNDLVLKV VYFHGNITGQ 
QIAEVTKLPF FGVLDKVLEF LKLEEYVDIV GAQGGFNERS FQYVIATKGR LKVHEVLDRS
QYAGPAPVPL DQYIAMVHRQ SVGDMVVDAK TVRQAFAHLV VSDRMLDRIG PAANSARSLF
LYGPPGNGKT TIAEGIANML GGHVLIPYAV EVDGQIIKVF DPLNHQLIEQ PATAAAREPA
VNFEGRPVVD SPLPDRRWLV CKRPRVMVGG ELILEQLELI FDPIAKVYEA PYQMKANGGL
FLIDDFGRQK CRPQDLLNRW IVPLEKKVDF LALQTGKKIQ VPFDVLIVFS TNLSPQDLVD
DAFLRRIRHK IEVPNPSPEE FRAIFQRVAK AKNIPYSDEG LRYLILERYK RDGRDLRSCH
PRDLCDQILD EAKYRGIPPS MSRELLDRAY DAYFVKLS