| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1868 |
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| Symbol | |
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| ID | 5208828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2310911 |
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| End bp | 2313262 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595476 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_001276207 |
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| Protein GI | 148656002 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCT TACCGTGGCC TGATTGGATG GATCATCTGC TGGCAAAGAG TAAGCGGTAT
GGCGGTGAGA CGTTAGCCGG GCATACCTGG GATGTGCTCT GTCGGCTCGC CGACCTCTAC
CGCCTGCGCC CGCACCTCAC AGACGATACG CGGCTCTGGC ACTGTCTGTA TTGGTCCGCA
TTTCTGCACG ATTTCGGCAA GGCGGCGCAG GGCTTTCAAC GTCGGTTGCG TGGCGGTCCG
AAATGGGCGC ACCGCCACGA AGTGCTCTCG CTGGCGTTTG TTGATGCGAT TGCCCACGAC
CTGAATGAAG CAGAACAGCG CTGGGTGGTG GCGGCAATTG TCTCACACCA CCGCGATGCA
ACCGAGATCG CCGAACTCTA CCCCTCCGGT CTGCGCAGGG ATCCGCTGAT CGATCTCTGC
AATGAACTTG ATGCCGAAAC AGTTGCCCAT TTGCTGCGCT GGATCGCCGA ATGCGCCAAT
CGGTGGCGCG ACCTGCTGGG GCTGACCGCA GACGTCGGTG CTATCGATCC GCAGCCGTGT
TCGGTGGGCG CGCAACGGGT GCGGTACTGG TTACGGATGT ACCACGACTG GGTTGACACC
CTGGACGGCG AGGGGTCTGA TGCCCGTCGC CCCGGCATTC TGCTACGCGG ACTGATCACC
AGCGCCGATC ATATGGCCTC GGCGCATCTG CGTCGTCTGC CGCCGCCTAT CCGCCTGTCG
TGGCAGGATG TGGCCATGAG GTGCAATCTG TCGCCGGATC AGGTCTACCC GCATCAGCGC
CAGAGCGCCG GGCAGAGCGC ACAATCGGCG CTCCTGATGG TGCCGACGGG TAGCGGCAAG
ACCGAAGCGG CGCTCTCATG GGCGCTCGGC GACGGGCGCA ACCCGCCGGC GCGCATTTTC
TATACCTTGC CGTATCAGGC CAGCATGAAT GCGATGTACG ACCGGTTACG GCAGACCTTT
GGCGATGATG TGGTCGGCCT GCAGCACGGT CGAGCGACAC AGGCGCTCTA CGCCAGGTTT
CGCGAAGGCG ATGAGTGGTC GGCGACTGCG GCACGGCGCG CGCAATGGGA AAAGAATCTC
AATCTGTTGC ACGCCCGTCC GCTGAAGGTG CTCAGCCCCT ACCAGTTGCT CAAAGCGCTC
TTTCAGCTGC GCGGCTTTGA GGCGATGCTG ACCGACTACG CGCATGCGGC GTTTATTTTC
GACGAGATTC ATGCCTACGA ACCGGAGCGC CTGGCGCTCA TAACCGGGCT GATGCGCTAT
CTGCGGGAAC ACTTTGCCGC CCGTTTCTTC GTCATGTCAG CAACGTTCCC TGAACTGATT
CGCAGTCACC TGCGCACCGC CCTGGGCGAT ACGCCCCTGA TCCGCGCAAC TCCAGACATT
TTTGACCGCT TCCGTCGTCA TCAGTTGTGC CTGCGTGATG GGGAACTGAC CGATCCGGCA
ACTATCACCG AGATCGTCGA AGCGGTGCGC AACGGCAAGC AGGTGCTGGT CTGCGCCAAC
ACGGTGGCAC GGGCGCAAAT GGTGCGCGAT CTTCTGACGC ACGCCGGTCT GACCGATGAA
CACCTGATCC TGATCCATAG CCGCTTCACC TACGGCGACC GTAGCCGGCT TGAGCAGGCG
ATAGGCGCGC GCTGCCGCAG CAATAGCGCG AATCGATCAC CGCTGGCGCT GGTTGCCACT
CAGGTGGTTG AAGTCAGCCT CGACATTGAT CTCGATGTGC TCTACAGCGA TCCGGCGCCG
CTCGAAGCGC TCCTGCAACG CTTCGGTCGG GTCAATCGCA AAGCGGCGAA AGGAATCTGC
CCGGTCTACG TCTTCCGCCA GCCTGACGAT GGACAGGGCG TGTACGGGCG CGACCGCGAC
CCGGAACGAT CCGGTCGTAT TGTGCGGGTA ACGCTCGCCG AACTCGAACA GCACGATGGC
GCGATCATCG ACGAAGCGAC CATCAATGAA TGGCTTGACC GGATCTACGC TGATCCCTTG
TTGAATCAGC AATGGCGCGA CGCCTATCAG CGGATGGCGC ACCAGGTCGA CCTGATCATT
CAGGGGATCC GCCCGTTCCA GAGCGACGAA CAGCGTGAAG ACGAATTCGA GCGCATGTTC
GATGGGGTCG ATGTGGTGCC GCAATGCTTT GAACGCGACT ACGTTCATCT GCTCGTCGAA
GAGCGCTTTA TCGAAGCGAA TGACTATCTG GTGAGCATCA GCAAACAACG TTTTGCGATT
CTGCGCAACC AGGGCAAACT GCGACCGGCG GAAGAGACCG ATCAGCGACG TGTCTGGGTT
GCGCAAACGC CCTATGATGC GCGGAATGGA CTCTCGTTCG GTGACCGTGT GGTCGATATG
GACTGGATTT GA
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| Protein sequence | MKPLPWPDWM DHLLAKSKRY GGETLAGHTW DVLCRLADLY RLRPHLTDDT RLWHCLYWSA
FLHDFGKAAQ GFQRRLRGGP KWAHRHEVLS LAFVDAIAHD LNEAEQRWVV AAIVSHHRDA
TEIAELYPSG LRRDPLIDLC NELDAETVAH LLRWIAECAN RWRDLLGLTA DVGAIDPQPC
SVGAQRVRYW LRMYHDWVDT LDGEGSDARR PGILLRGLIT SADHMASAHL RRLPPPIRLS
WQDVAMRCNL SPDQVYPHQR QSAGQSAQSA LLMVPTGSGK TEAALSWALG DGRNPPARIF
YTLPYQASMN AMYDRLRQTF GDDVVGLQHG RATQALYARF REGDEWSATA ARRAQWEKNL
NLLHARPLKV LSPYQLLKAL FQLRGFEAML TDYAHAAFIF DEIHAYEPER LALITGLMRY
LREHFAARFF VMSATFPELI RSHLRTALGD TPLIRATPDI FDRFRRHQLC LRDGELTDPA
TITEIVEAVR NGKQVLVCAN TVARAQMVRD LLTHAGLTDE HLILIHSRFT YGDRSRLEQA
IGARCRSNSA NRSPLALVAT QVVEVSLDID LDVLYSDPAP LEALLQRFGR VNRKAAKGIC
PVYVFRQPDD GQGVYGRDRD PERSGRIVRV TLAELEQHDG AIIDEATINE WLDRIYADPL
LNQQWRDAYQ RMAHQVDLII QGIRPFQSDE QREDEFERMF DGVDVVPQCF ERDYVHLLVE
ERFIEANDYL VSISKQRFAI LRNQGKLRPA EETDQRRVWV AQTPYDARNG LSFGDRVVDM
DWI
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