| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1828 |
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| Symbol | |
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| ID | 5208787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2256498 |
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| End bp | 2257874 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595435 |
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| Product | glycogen debranching protein |
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| Protein accession | YP_001276167 |
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| Protein GI | 148655962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAA ACGCGACCGG ATGCAAACGA ACAGTAGAGA AGTTTATGAA CTCCAATCTC
ATCGATGAAG CGCGCAACCG CGCAATGGAC GTGCTCTCCC GTTGTTACAC ACCGCATGGC
TTTCGCGCTT CGGCGCTCGC GGCGGGCTAC CCGCAGATCT GGGCGCGCGA CAACGGCATC
ATGATGCTGG GCGTCGTTGC CAGCGGCGAT CCCGCCCTGA TCGCGTGCAG TCGCGCAGCG
CTCGAAACCC TGGGCGCAGC GCAATCGCGG CGTGGGCTTA TCCCGCTCAA TATTAACCCC
GACACCGGCT ATATCAGCAC GGAGAACGCC GGTGCAGCCG ACTCGAATCT GTGGTTCATT
CTGGGGCATT ACCTGCACTA CTGCGCCACC GGTGACGCTG CTTTCGTGCA GGCGCACTGG
AAGGAGATCG ACAGGGCGAT GGTATGGCTC GAATACCAGG ATATGAACGA GTGCGGGTTG
ATCGAAATTC CGGAGGCGGG CAACTGGATG GACCTGCTGG CGGTGCGTTA CAACACGCTG
TACGACAATG TGCTGTACTA CGCAGCGGCG CTGGCGCATG AACAACTCCG CACCCTGGTG
GCGCCGGAGA TGCCGGCGCA TCGGTTGACG ATTGACGCTG CTGGTATTCA CGAACGCATC
AATCTGCTGT TCTGGATCGA CCGCTGCTGG GTCGCCGAGC ATTTTGCCGC TCATCTCGAA
CGTCTCAAGG CGATGCGGCT GGAATGGTTC ATGCTGTACC ACAATATCGG CATGATCTCC
AGCCGACCGT TCTATCTGCC ATGGGTCGCC TTCCGCGAAT TTGGCGACTG GTGCGACAGT
CTCGCCAATC TGCTCGCCAT TTTGACCGGC GTGGCGGATG GGCATCGCAC GGAACACATT
CTGCGCTTCA TGTACCAGGT CGGCATGGCG GAACCCTACC CGACGAAAGC CATTCACCCG
CCGATCTATC CGGGCGAAGC GCACTGGCGC GAGTACTACC GCAGTCGGAC GCTCAATCTG
CCGCACCAGT ACCACAACGG CGGCATCTGG CCCATGATCG GCGGCTTCCA CGTGGCGGCG
TTGGTGCGCC ATCGCTGGCA CAATCAGGCG GAGCGATTGC TCCGGTCGCT GGCAGAGTGC
GTCTATCAGG GATTGCACTG CGACTGGGAG TTCAACGAAT GGATGCACGG AGAAAGCGGT
CATCCGATGG GGTATGCGCA GCAGGGTTGG TCGGCTGCAA TGTATCTGTA CGCCGACAAC
ACGGTGCGAA CCGGGCGGAT GCCGCTGTTT GATCAACTGC TGGCGGTCAA GCCAGCAGCA
GCAGTGTCGG CGGAGGTAAA CGACGCCTAT GTCCGCCCTG GCGGGGGACC GGTCTAA
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| Protein sequence | MDQNATGCKR TVEKFMNSNL IDEARNRAMD VLSRCYTPHG FRASALAAGY PQIWARDNGI
MMLGVVASGD PALIACSRAA LETLGAAQSR RGLIPLNINP DTGYISTENA GAADSNLWFI
LGHYLHYCAT GDAAFVQAHW KEIDRAMVWL EYQDMNECGL IEIPEAGNWM DLLAVRYNTL
YDNVLYYAAA LAHEQLRTLV APEMPAHRLT IDAAGIHERI NLLFWIDRCW VAEHFAAHLE
RLKAMRLEWF MLYHNIGMIS SRPFYLPWVA FREFGDWCDS LANLLAILTG VADGHRTEHI
LRFMYQVGMA EPYPTKAIHP PIYPGEAHWR EYYRSRTLNL PHQYHNGGIW PMIGGFHVAA
LVRHRWHNQA ERLLRSLAEC VYQGLHCDWE FNEWMHGESG HPMGYAQQGW SAAMYLYADN
TVRTGRMPLF DQLLAVKPAA AVSAEVNDAY VRPGGGPV
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