| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1778 |
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| Symbol | |
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| ID | 5208737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2195829 |
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| End bp | 2197253 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595386 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001276118 |
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| Protein GI | 148655913 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000929318 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0431251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCA ACGAAGAACG TACCCGGAAC CGCATCCTGC TTGTGCTGTT TGTTGGTGTT
CTGATGGCAG CGCTTGATAT TGCCATCGTT GGACCAGCGC TGCCGGCGTT GCGCGAGCAT
TTTGGAATCG ACGCGCGTGC GGCATCGTGG ATGTTCGTCG TCTACGTGCT CTGCAACCTG
GTTGGAACGC CGTTCATCGC CAAACTGTCG GACCGGCTGG GGCGGCGCAC GCTCTACACT
GCCTGTGTTG CCCTGTTTGG TCTGGGGTCA TTGATCGTCG TGGCGGCGCC GACGTATGCG
CTGGTGCTGG CGGGTCGCGC TATCCAGGGG TTGGGCGCGC GTGGCATTTT CCCGGTTGCC
AGTGCGGTGA TCGGTGATAC ATTTCCGCCG GAGAAGCGCG GCAGCGCGCT GGGACTGATC
GGCGCGGTGT TTGGTATTGC ATTCCTGATC GGACCGATCA TCGGCGGTGT GCTGCTCCTG
CTTGGATGGC AGTGGCTCTT TCTGATCAAT CTGCCGATTG CACTTGCGCT GATCGGGTTT
GGCGTGAAAT TATTGCCCGC CATCCGCGCG GCAACGCCGC GTCCCTTCGA CTGGGGCGGG
ACGGTCGTGC TTGGGGTGAT CCTGGCATCG CTGGCTGTGG CGCTGAGCGA TCTTGCCTAC
CTGCTCGACG AAGCGAGTGT GAGCGGTCTG GTGAATGCAA TCAGTGCATC ATCGACCTGG
TTCCTGCTGG TGCTGGCACT GGCGCTCATC CCGCTATTCT TGCAGATCGA GCGTCGTGCG
GATGACCCGG TGCTTGACCT GAATCTGTTC CGCAACTGGC AGATTGCGCT GGCTGGCGCA
CTCTCCTTTG GCGCAGGCTT GAGCGAGGCG GTAACGTTGT TCGTGCCATC GTTGCTTGTC
GCAGCGTTTG GCGTCACGCC ATCAACTGCG AGTTTTATGC TTGTGCCGAT GGTGCTGGCG
ATGGCGGTCG GTTCACCGCT GTCGGGGCGC ATGCTTGACC GGATTGGCTC GAAAATTGTG
GTGCTGACCG GTACGGCGTT GATAGCAACA GGTTTGCTGC TGGAAGGGAT GCTGGCAACC
TCTCTCGTCG CGTTCTACGG CTTTGCTGCG CTGTTTGGCA TTGGTATCGG CGTATTGCTC
GGCGCATCGC TCCGGTACAT CCTGTTGAAC GAAGCGCCAG CTGCGGAACG TGGCGCGACG
CAAGGGGTGC TGACGGTATT TATCAGCATT GGTCAGTTGA TCGGCGCGGT GGTGCTCGGC
GCGGTTGCAG CAGCGCGCGG TAGCGATGTC GGCGGATACG CAGCGGCGTT TCTGGTTGTC
GGCGTCGTGA TGCTGGCGCT CTTCATCGCT TCGTTCGGTT TGAAGAGTCG CGCCGAGGAA
CTGGCGACCC GCCAGCAATG GCAGAGCGGA GCTTCGGCGG CATGA
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| Protein sequence | MTRNEERTRN RILLVLFVGV LMAALDIAIV GPALPALREH FGIDARAASW MFVVYVLCNL
VGTPFIAKLS DRLGRRTLYT ACVALFGLGS LIVVAAPTYA LVLAGRAIQG LGARGIFPVA
SAVIGDTFPP EKRGSALGLI GAVFGIAFLI GPIIGGVLLL LGWQWLFLIN LPIALALIGF
GVKLLPAIRA ATPRPFDWGG TVVLGVILAS LAVALSDLAY LLDEASVSGL VNAISASSTW
FLLVLALALI PLFLQIERRA DDPVLDLNLF RNWQIALAGA LSFGAGLSEA VTLFVPSLLV
AAFGVTPSTA SFMLVPMVLA MAVGSPLSGR MLDRIGSKIV VLTGTALIAT GLLLEGMLAT
SLVAFYGFAA LFGIGIGVLL GASLRYILLN EAPAAERGAT QGVLTVFISI GQLIGAVVLG
AVAAARGSDV GGYAAAFLVV GVVMLALFIA SFGLKSRAEE LATRQQWQSG ASAA
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