| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1766 |
|---|
| Symbol | |
|---|
| ID | 5208723 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 2182217 |
|---|
| End bp | 2183218 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640595372 |
|---|
| Product | dihydroxyacetone kinase subunit DhaK |
|---|
| Protein accession | YP_001276106 |
|---|
| Protein GI | 148655901 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2376] Dihydroxyacetone kinase |
|---|
| TIGRFAM ID | [TIGR02363] dihydroxyacetone kinase, DhaK subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.471951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TGATCAACAA ACCCGAGGAT GTGGTTGTCG AGGAGTTGAA GGGCATTGAA
TACGCGCATC CCGATCTGGT GAAGGTTCAC TACGATCCGA ACTTTATCTA TCGCGCCGAT
GCGCCGGTGC AGGGCAAAGT CGCGATCGTC TCCGGCGGCG GATCCGGTCA CGAACCGATG
CACGGCGGCT TCGTCGGTAT GGGCATGCTG GACGCAGCCT GTCCTGGCGC TGTCTTTACC
AGCCCCACCC CCGACCAGAT GCTCGAAGCG GCGAAAATGG TCCACGGCGG CGCTGGCGTG
CTGTACATCG TCAAGAACTA CACCGGCGAC ATCCTCAATT TTGATATGGC GGCCGACCTG
GCGCGTGCGG AAGGAATTGA GGTAGAATCG GTTGTGACCA ATGATGATGT GGCGGTGCAG
GATTCGCTCT ACACTGCGGG CCGACGCGGT GTGGGCGTCA CGGTGCTGGC GGAGAAGATC
TGCGGCGCAG CGGCTGAGGA GGGGCGTTCG CTCGGCGAGG TCGCTGAGAT ATGCCGCAAG
GTCAACGGTT GGGGGCGCAG CATGGGTATG GCGCTGACCA GCTGCACCGT ACCGCATGCG
GGCAAGCCAA CCTTCGATCT GCCCGACGAC GAAATGGAGA TCGGCATCGG CATCCATGGC
GAACCGGGCC GCACCCGTAT GAAACTCAAG TCTGCCGACG AGATCACCGA GATGCTGATG
GAGCCGATCC TGAACGATTT GCCGTTCCGC GCGGGTGACG ATGTGCTGCT GTTTGTCAAC
AGCATGGGCG GCACCCCGCT GATCGAACTC TATGTGGTGT ATCGGAAGGC GTATGAGATC
GCAGTCAACG CGGGTCTTAA GGTGGTACGC AACCTGATCG GACCGTACAT TACCTCGCTG
GAGATGGCGG GTTGCTCGAT CACGCTGCTG AAAATGGATG ACGAACTGAT CAGGTTGTGG
GACGCTCCGG TCAAGACTCC TGCGCTGCGG TGGGGAGTGT GA
|
|---|
| Protein sequence | MKKLINKPED VVVEELKGIE YAHPDLVKVH YDPNFIYRAD APVQGKVAIV SGGGSGHEPM
HGGFVGMGML DAACPGAVFT SPTPDQMLEA AKMVHGGAGV LYIVKNYTGD ILNFDMAADL
ARAEGIEVES VVTNDDVAVQ DSLYTAGRRG VGVTVLAEKI CGAAAEEGRS LGEVAEICRK
VNGWGRSMGM ALTSCTVPHA GKPTFDLPDD EMEIGIGIHG EPGRTRMKLK SADEITEMLM
EPILNDLPFR AGDDVLLFVN SMGGTPLIEL YVVYRKAYEI AVNAGLKVVR NLIGPYITSL
EMAGCSITLL KMDDELIRLW DAPVKTPALR WGV
|
|---|
| |