| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1740 |
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| Symbol | |
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| ID | 5208697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2146413 |
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| End bp | 2148632 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640595346 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001276080 |
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| Protein GI | 148655875 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.336236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATG CTCCCGCTCT TCTTTCGCTC GATGGCGTCT GGAAACTGCT GCCGGTCGAC
ACGTTTCGTC AGGGGTTTTA TCCGCCTGAT GATGATACCT GGTTGGCGCA GGAGATACCG
GCGCACTGGC AACAGCACCC GCTGCTGGAA CGCTATGCGG GGTGTATGGT CTACCGGCGG
CGGTTCACCC TGCCGGACGC GCCTGCCATC CCGCCGGATC AGTCCGCGCC GATCCGCTAT
TTCCTGCGCT TCAACGGCGT TTTCTATTGG GCGCAGCCGT ACTTCAACGG CGTTGATCTG
GGGCGCCACG AAGGGTACTT CGAGCCGTTC GAGCACGAGG TGACCGCCTG GATCGCTCCG
GAGAATGACA TTGTCGTCGA GGTCGAATGT CCCGATGAGG TCAATAAGTC CGGCAAGCGC
CTGATCACCG GCATCTTCTC GCACTGGGAC TGCATGGACC CGCTGGCGAA CCCCGGCGGC
ATCTGGTTGC CGGTCGAACT GGTGAAGACC GGTCCAGTGC GTCTCCGTGA GGTGCTGCTT
CAGACCGAGG CATCCGGCGA GTCGCTGGCG GAGTTGCGTT TTCGTGCGCT GTTCGATGCG
CGCGCAGCGC GTGATGTCGT GTTGCGCTGG ACGTTTGCGC CGGTCAACTT CGCTGGCGCC
GTGCAGACGA TTGAGCAGCG CCGCGCCCTG GCGGATGGAG CGCATGAGAT CGCTGGCGTT
CTGCTGCTGA ACGATCCGCG TCTCTGGTGG ACCCACGACA TGGGTGCGCC GAACCTGTAT
GCGGTGACGC TCGAAGTGCT CTGCGATGGG GTAGTCTCAG ATGCGCGCAC CTTCCGCTTC
GGCATTCGCA CATTCGAACT GCACGACTGG ATACCCTATC TCAACGGAAC GCGCTTCTTT
GTCAAGGGGA ACAACTATCC GCCGACCGAT GTGCGGATTG CAACCACCAC ACGCGAACGG
TGTCTCGTAG ATCTCCGCCT GGCGCGCGAG TGTCATATGA ACATGCTGCG CGTCCATGGG
CACATTGCGC ACCCGGCGCT CTACGACGCC GCCGATGAGA TGGGCGTTCT GCTCTGGCAG
GATTTCCCGC TGCACTGGCT CTACCGTCGT GAAATCCTGC CCGAAGCGCG GCGTCAGGCG
CGTGCCATGG TGCGCCTGCT GGGCAACCAT CCATCGGTCG CACTCTGGTG CATGCACAAC
GAACCGGTGT ACGTCGTCGA TACGCGCGAC GAACGCCTGA TAACGCGCCT GCGCACCTAT
GCATCGATGT TCATCTTCAG CTGGAACCGC GATGTGATGG ATAGCGAGTT GAAGCGCGTC
GTCGAACGGG AAGATGGCAA ACGCCCGGTC GTGCGCTCAT CGAATGAGTT TCCCATACCG
GGAATTCGCA AAGGAACCAG CACCCATTTC TACTACGGCT GGTACAAAAT CTATGGACGC
CTCGAAGAGT GGGAGCCGCT GATCCGTCGC TTCCCGCAGT TGGTGCGCTT CGTCACCGAG
TTTGGCGCCC AGAGTTTCCC GAATGTCGAG AGTTGCGTCA GATTCATGGA TGCCGACATC
AGGCGCATCG ACTGGCAGCA TCTGGTTGAG CGCCACCAGT TTCAGGCGGA TATCATGGCG
CACTGGTACG ACTGGCGCGC CGCCCGTTCG CTCGACGAAC TGGTGCAGAT GTCGCAGGAG
TATCAAATCA AGATCAATCG CCATTATATC GACCGGTTGC GGTTGCGCAA ATATCGTCCA
ACCGGCGGTA TTATGCCGTT TATGTTTCAC GATGCGAACC CGTCGGTTTC CTGGTCGATC
ATCGACTACT GGCGGGCGCC GAAGCGATCA TATGATGCCA TGCGCATGGC GTTCAGTCCC
CAGTATCTCT TCACCGTGCT GGAAAAAGAG TCGATCACGG TTGGCGAAGC CCTTGATCTG
CCGGTGTATA TCGTCAACGA CGACCACCGT GACGATGTCG TTGCCATTAC CGCGCGCCTG
ATCGGTCCCG ACGATGCAAC GCTGGCGTGT GTCGAGCGTT CGTTCACGCT TCCTTCCGAC
TGTATGGCGA TGGAAGTTGA GCGTCTGCGT CTGATCCCGC CCGATCCCGG AACGTATCGC
CTGGAGCTGA TCCTGCGGGG CAGCCGGGTG GAAACACTCG TCAACACCTA TCTCATTCAC
GTTGCAAGCG CTCAGAAAGG AACCCTGTAT GCTCGACAAA GCTCAAGCCA TCGCTCCTGA
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| Protein sequence | MTNAPALLSL DGVWKLLPVD TFRQGFYPPD DDTWLAQEIP AHWQQHPLLE RYAGCMVYRR
RFTLPDAPAI PPDQSAPIRY FLRFNGVFYW AQPYFNGVDL GRHEGYFEPF EHEVTAWIAP
ENDIVVEVEC PDEVNKSGKR LITGIFSHWD CMDPLANPGG IWLPVELVKT GPVRLREVLL
QTEASGESLA ELRFRALFDA RAARDVVLRW TFAPVNFAGA VQTIEQRRAL ADGAHEIAGV
LLLNDPRLWW THDMGAPNLY AVTLEVLCDG VVSDARTFRF GIRTFELHDW IPYLNGTRFF
VKGNNYPPTD VRIATTTRER CLVDLRLARE CHMNMLRVHG HIAHPALYDA ADEMGVLLWQ
DFPLHWLYRR EILPEARRQA RAMVRLLGNH PSVALWCMHN EPVYVVDTRD ERLITRLRTY
ASMFIFSWNR DVMDSELKRV VEREDGKRPV VRSSNEFPIP GIRKGTSTHF YYGWYKIYGR
LEEWEPLIRR FPQLVRFVTE FGAQSFPNVE SCVRFMDADI RRIDWQHLVE RHQFQADIMA
HWYDWRAARS LDELVQMSQE YQIKINRHYI DRLRLRKYRP TGGIMPFMFH DANPSVSWSI
IDYWRAPKRS YDAMRMAFSP QYLFTVLEKE SITVGEALDL PVYIVNDDHR DDVVAITARL
IGPDDATLAC VERSFTLPSD CMAMEVERLR LIPPDPGTYR LELILRGSRV ETLVNTYLIH
VASAQKGTLY ARQSSSHRS
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