| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1712 |
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| Symbol | |
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| ID | 5208669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2105753 |
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| End bp | 2107198 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640595318 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001276052 |
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| Protein GI | 148655847 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC ATACGCCCGA CTGGGTCAAA CACGCTGTTT TCTATCAGAT TTTTCCCGAC
CGTTTCGCCT GGAGCGCCCG GGTCGCCAAA CCGAACAACC TCCAGCCCTG GGACAGCCCT
CCAACACCAG AAGGGTACAA AGGCGGCGAT CTGTTGGGCG TCGTCGAACG GCTGGATTAC
CTGCAGGATC TGGGGATCAC GGCGATCTAC TTCACGCCGA TCTTCCAGTC CGCCTCGAAC
CATCGGTACC ACACCCACGA CTACTATCAG GTCGATCCGA TGCTCGGCGG CAACCGGGCA
TTCCGTGAGT TGCTGGAAGC GTGCCACCGG CGCGGCATGC GCGTCGTGCT CGATGGCGTC
TTCAATCACG CCAGCCGCGG CTTTTTCCAG TTCAACGACA TTCTCGAAAA CGGACCCCAC
TCCGCGTACC TGGACTGGTT CTTCATCGAG GGATGGCCCC TGCATCCGTA TGATGGCGCG
CGCCCGGCAA ACTATCGCGC GTGGTTCAAC AACCGGGCGC TGCCAAAGTT CAACACCGAC
AACCCGCAGG TGCGCGAGTT TCTCATGCAG GTCGCCGAGC ACTGGATCCG CCAGGGCATC
GACGGCTGGC GACTGGATGT GCCGTTCGAG ATCACGACCG AAGGGTTCTG GCAGGAATTC
CGCCAGCGGG TGAAAGCCAT CAACCCTGAA GCCTACATCG TCGGCGAGGT ATGGCGCGAT
GCGCGCCAGT GGTTGCAGGG CGACCAGTTC GATGGCGTGA TGAACTATCT CTTCGCCGGA
CCGACGATTG CCTACGCCGC CGGACCGCGC GTCGATCCGG CGCAGGTGGT CGGAAGGGAT
TATGTCACAT CACCGCCGCT GACCGGTGCC GAGTATGCGC GGGTGATCGA CGACGTGGTG
ACTCTCTACG ACTGGGAGAT CCAACTGACG CAGCTGAACC TGTTCGACAG CCACGACACG
GCGCGCCTGC TGACCATCGC GCGCGGCGAC CGCAGCAGTG TGCGCCTGGC GACGATCCTG
CTCATGACCT TTCCCGGAGC GCCGTCGGTG TTCTACGGAG ACGAAATCGG ACTGGAGGGA
GGCGTCGATC CGGATGCCCG TCGCACGATG CCGTGGGATC GCCCGGAAAC CTGGGATATG
GCGGCGCTGG CGTACCACAA GCGCCTGATC GAACTGCGTC ACACACTGCC AGCGCTGCGC
ACCGGCACAT TCCATACGCT CTACGCCGAT GACGCTGTGT TCGCCTTTGC GCGCAAACTG
GAAAACCAGA CGGTGATTGT CGTGGTCAAC AATGATGATC AACCGCGCCG CGTCTCCATC
CCGGTCGCCG GTATGCTTCC CGACGGGCAC GACCTGATTG CTCGCTACGG CAACTACCGC
AACCGTATCA TTCATGGTAC ACTTGAAGTA CAGGCGCCGG CTCGCGATGG ACTGATCCTG
GCATGA
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| Protein sequence | MTIHTPDWVK HAVFYQIFPD RFAWSARVAK PNNLQPWDSP PTPEGYKGGD LLGVVERLDY
LQDLGITAIY FTPIFQSASN HRYHTHDYYQ VDPMLGGNRA FRELLEACHR RGMRVVLDGV
FNHASRGFFQ FNDILENGPH SAYLDWFFIE GWPLHPYDGA RPANYRAWFN NRALPKFNTD
NPQVREFLMQ VAEHWIRQGI DGWRLDVPFE ITTEGFWQEF RQRVKAINPE AYIVGEVWRD
ARQWLQGDQF DGVMNYLFAG PTIAYAAGPR VDPAQVVGRD YVTSPPLTGA EYARVIDDVV
TLYDWEIQLT QLNLFDSHDT ARLLTIARGD RSSVRLATIL LMTFPGAPSV FYGDEIGLEG
GVDPDARRTM PWDRPETWDM AALAYHKRLI ELRHTLPALR TGTFHTLYAD DAVFAFARKL
ENQTVIVVVN NDDQPRRVSI PVAGMLPDGH DLIARYGNYR NRIIHGTLEV QAPARDGLIL
A
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