| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1689 |
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| Symbol | |
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| ID | 5208646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 2077908 |
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| End bp | 2079356 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640595295 |
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| Product | YD repeat-/RHS repeat-containing protein |
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| Protein accession | YP_001276029 |
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| Protein GI | 148655824 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5529] Pyocin large subunit |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGACGC CGACCGCCAC CGCCACCCCC TCCCCCACGC CTGCGGCGGT CGCCCCGCCG
ACGTTGCGCG AGACGTATGC CTACGACCGG CTGGGGAACC TGCGCGTCAA AGCCGGCGTG
GGATATGAGT ACCCGGCGGC GCGCCAGCCG CGCCCGCACG CCCCCATCCG CGTCGGCGGG
CAGCCGTATG CCTACGACGC CAATGGCAAC CTCACGAGCG GCGGCGGGCG GACCTTCGTC
TGGAACGGCT GGAACCAGCT CGCCAGCGTC TCCCAGGCGG GCGTGACCGA AACCTACGCC
TATGACGCCG CCGGCGCGCG GGTGACGCGC ACGAGCAACG GCGCGACCGT CGTCACCGTC
GCTGACCTCT GGGAGCGCAC CGTCGGCGGC GCAACGACGC ACTTCTACCG TTTCGGCGCC
GACGTCATCG GCGTGCGGCG CAGCGACCAG GGAACGCAGT ATCTCTTCAG CGACCACCTG
GGGAGCGTGA GCGCAGCGAC GAACGCAAGC GGCGCGCTCG TAGGAATGCA GCACTACGAC
CCGTGGGGAC GGGTGCGCAC CGGCGGCATC GGGCTGACGG CGCGCACCTT CACCGGGCAG
CGGCTTGATG CGACCGGATT GTTGTATTAC CATGCTCGGT ACTATGATCC GACGCTCGGA
CGGTTCATCT CACCGGATAG CATCGTTCCT GAGCCGGGCA ACCCGCAGAG CTTCAACCGC
TTTGCGTACG TTTACAACAA TCCGCTGAAG TACACCGACC CGACGGGGCA CTGGATCGAG
AGCGCGGTTG ATATTGCATT CATCGCCTAC GATATCTGGG ACATTCACCA GAACGGGCTG
ACGTGGGACA ATGGGCTGGC GCTGGCGGCG GATGTGGGCG GGCTGCTCCT GCCGGGGCTG
ACCGGCCTGG GCATGGCGGT GCGCGGCGGC AAGGCGGCGA AGGCGGCTGC AGAGGCGGCG
AGCCACGGCG ATGAGGCCGC AGACCTGGCC CGATCAGCAA CCAGGATTTC CGAGAACCTG
GCTCAGGAAG CAGCTCAGCG CACCCTCCCT CTTGGTTTCA AGAACGCCGA TGAATTCGCC
CAATTTGGCG CTCGACTAAA ACAAGGATTG CAAAATGCAG GGTACGGAGA TGTTCAGGCA
GCCTTCCGTG GTAGTTCCGT CACTGGCGTA AGCTTCAAGA CAGGTGCACC CTTCGACGTC
GGACGCGTGA GTGACTTTGA TCTCGCTTTG GCGAGTTCCA CTCTCCTGCA GCGCGCTAAA
GAACTCGGCA TCGGGCTTCG GGGCGGCGGA ACACGGACCG AACCGCTCGA TGAGGAACAC
CTGAAAATGC TGGGCCTCTT GGATTTAAGC CGAGAACTTG GTGAAATGAC CGGGAGACCT
GTGACCTTTA TGATCTACGA GTCCATCGAG TCCATCGCAC AAAGGGGTCC TTACATCATC
GTGCGCTAA
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| Protein sequence | MPTPTATATP SPTPAAVAPP TLRETYAYDR LGNLRVKAGV GYEYPAARQP RPHAPIRVGG
QPYAYDANGN LTSGGGRTFV WNGWNQLASV SQAGVTETYA YDAAGARVTR TSNGATVVTV
ADLWERTVGG ATTHFYRFGA DVIGVRRSDQ GTQYLFSDHL GSVSAATNAS GALVGMQHYD
PWGRVRTGGI GLTARTFTGQ RLDATGLLYY HARYYDPTLG RFISPDSIVP EPGNPQSFNR
FAYVYNNPLK YTDPTGHWIE SAVDIAFIAY DIWDIHQNGL TWDNGLALAA DVGGLLLPGL
TGLGMAVRGG KAAKAAAEAA SHGDEAADLA RSATRISENL AQEAAQRTLP LGFKNADEFA
QFGARLKQGL QNAGYGDVQA AFRGSSVTGV SFKTGAPFDV GRVSDFDLAL ASSTLLQRAK
ELGIGLRGGG TRTEPLDEEH LKMLGLLDLS RELGEMTGRP VTFMIYESIE SIAQRGPYII
VR
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