Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1672 |
Symbol | |
ID | 5208629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2057226 |
End bp | 2059910 |
Gene Length | 2685 bp |
Protein Length | 894 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640595280 |
Product | forkhead-associated protein |
Protein accession | YP_001276014 |
Protein GI | 148655809 |
COG category | [R] General function prediction only |
COG ID | [COG3889] Predicted solute binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCGA ATGATCCGTC TGTGCCGGAT ACGCCGCCCA ATCCATATGC CACACGCGCT GTCTCCGCTT CAGAGGGCGG TAGTGCCGCG TTCGTCGCTC TGCTCGATGC GCGGGGCCAA CCGACGCAGT ATGCCGAAGT CTCTTCCGAT GGCGTCACGA TCGGGCGTCT CAAGGGCAGC GATCTGGTGC TCGACGATCC CACCATCTCG CGCAATCACG CGCGGGTGGA GTGGGATGGA CGTCACGCCA GGGTGACCGA TCTCGGGTCG AAACTGGGCA CGTTCCTCGG CGCTGTGCGT CTGATGCCGC AAACGCCTTA TGAGTGGTCG CCTGATCAAC CGCTGCGCAT CGGTCGCTAT GTATTCCGGC TGTATCCCGG CGCCCTCCCA CCGGCGGCAG TGACTGCACC TTCTGCTTCT CCTGTTGCCG GGTCAGGTCG CCCCGAAGCG ACAGCTGGCG TTTCTTCCGC TGTTGCTGAG GCGCCGACCG GTCGCCTGCC GCCGCCTGAG CCATTGCAGG GTGAGGCTGA ACCGGCGCCT GCCCCGATTG CGCTTTCGAT TGCGCCGGAG CAGGTTACGC TGACGCTCGT GCCGGGGGAA CGCGCCAGCG TCAATGTGCG CGTCAGAAAC AACACCACGC TACCGCTCAC GATTTCGCTG ACCATCGATG GTTTTCCATC GGAGTGGGTC GATGGCATGC CCACGCTCTC GGTGGCGCCC GGGGCGCAGG CATCGGCGAC CCTGACAGTC TCTGTGCCGG CGGCCAGCGC AAGTCTCGCG GGCGCGCGTC CGGTTTCGAT TCAGGCATTT GCTGCCGAAC TGCCGACGCT CATGTTCGAG GCGCCGCTCG AATGGCATAT CGCCCCCTTT CTGGCTGGTG AACTGGCAAT CACGCCGAAG CGCGCCTCTG GTCGCGATCA GGCGGTGTAT ACCATTCAGG TGCGGAACAA TGGCAATGTT CAGGCTGCGT ATGTGCTGAG CGCCGCCGAC GAGCCGCAGG AACTGGAATA CTCCTTCGCG CAGGAGCGTG TGAGCGCTGC GCCCGGCGCA ATCGCCGAAA CATCGCTGAC CGTGATTGCC CGACGTCGCA TGTTCGGCGC CGATCGACGC CATACCTTTA CCGTTCAGGC GGTCGAGACC GATGTGCAGC AATCGATGCG CGACATATTG AGCGCGCAGG CGCTGTTCGT TCAGACGGCG ACATTTCCGC TCTGGTTTGT GCCGTTGATC ATCGGGTTGC TCCTCTTCGG ATTGCTATGC GGTTTCGCAG TTCTCCCGGC ATCGCTTGCC AGCGCGTTGC CGGGGTACGG CATCTTTGCC GCTCCCACCG AACCGCTCCC TGATACCCGT GGGACCGCCG TGGCGCAGGC GACGGCGACT GCGCAGCAGT TGCAACTCAC GGAGCAGCAG GGGCTGGCGA CGATTGCAGC GCTGGAGCAG ACTGCGACTG CCGCGTCCGC CGATCAGCGC GTCGAATTTC AGGCGACGCT GGTGGCACAG TTCGCCACTG CGACCGCGAT TGCGATCCAG TTTACGTCGC TGCCAACGCT GCCGCCGCCG ACAGAGGCGC CATTTGCGAC GGTTCCCCCC GGTACAGCGC CAGCGCCCAC GGTGACCATG CCACCGGTTA CTCCTTCGGC GACGGCAACG CCAACGCGAA CACCATCACG CACACCGGCG CCATCACAGA CCCCGGCGCC CGGTCTGCCG CAGGCGACCA TCGAGGATGC GACGGTGCAA CGCCTGACGA GCGGCGAAAC GTCGCTGATC TTCCGGGTGC GCCTCTCGAA CGCAAGCGCT TCGATTGTTT CGATTGCGTA CACGACGGAG GATGATACAG CGCGCGCGGG GGTCGATTAC CGCAGTGTGA ACGGAACATT GACCTTCAAC CCCGGCGACC TCGAACGGGA GATCGCCGTT CCGGTGTTGC CCGATGCTGC CACGGCGATC GATCTGCGCT TGCGAGTCGT TCTGACGAGC GCCGCGGGCG CCAATCTTGC CCGGGGCATC GCTGTCGGGA CGATTCGCCC GGCTGCCGGG ATAGCAACTG CCACGTTCAC GCCCACGCCG ACCCCATCGG CGACGCCGAC CAGGACGCTC TCACCAGCGC CGACCAATAC CCTGACGCCG GTTCCGCCAA CGCCGACGAA CACCTTCACG CCAGTTCCGC CAGCGACGCC GACGAACACC TTCACGCCGG TTCCGCCAGC GACGCCGACG AACACCTTCA CGCCGGTTCC GCCAACGCCA ACTGAGACGC CGACTCCGAC GCCGACCGAG ACGTTGACTC CAACGCCGAC TGAAACCCCC GAACCGGTTA ATCTGACCCT CACTGCGCCG TCGTCGGTCG CTGTTACCGG TGGCGCTGCC GCGCCCTGGA CGAATATTGC GGGGGTGGTG ATCGGAGGCG TTTCTGCCGG TGATACCGTC ACCGTGACGC TCAGCATTGC GGGAGTGGAT CCATCGAACA ATGCAGGGCA AATGCGCATC ACCGGCATTG GCGGGTTCAC CGAGACCACT GCTCCGCAAA CGTTTACGAC CACCCGCGCC GATGCCAATG ATCGACTGAC GCGCCTTCAG TACCGGCGTG GTCAGCCCGG CGCGGCGAGG ATGACGATAA CCGTTGTTCA TGGCAGCGGG CAGAGCCGGA CGGTGCAGAT CGATCTCATT ATCAGTGCGC CATAA
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Protein sequence | MAPNDPSVPD TPPNPYATRA VSASEGGSAA FVALLDARGQ PTQYAEVSSD GVTIGRLKGS DLVLDDPTIS RNHARVEWDG RHARVTDLGS KLGTFLGAVR LMPQTPYEWS PDQPLRIGRY VFRLYPGALP PAAVTAPSAS PVAGSGRPEA TAGVSSAVAE APTGRLPPPE PLQGEAEPAP APIALSIAPE QVTLTLVPGE RASVNVRVRN NTTLPLTISL TIDGFPSEWV DGMPTLSVAP GAQASATLTV SVPAASASLA GARPVSIQAF AAELPTLMFE APLEWHIAPF LAGELAITPK RASGRDQAVY TIQVRNNGNV QAAYVLSAAD EPQELEYSFA QERVSAAPGA IAETSLTVIA RRRMFGADRR HTFTVQAVET DVQQSMRDIL SAQALFVQTA TFPLWFVPLI IGLLLFGLLC GFAVLPASLA SALPGYGIFA APTEPLPDTR GTAVAQATAT AQQLQLTEQQ GLATIAALEQ TATAASADQR VEFQATLVAQ FATATAIAIQ FTSLPTLPPP TEAPFATVPP GTAPAPTVTM PPVTPSATAT PTRTPSRTPA PSQTPAPGLP QATIEDATVQ RLTSGETSLI FRVRLSNASA SIVSIAYTTE DDTARAGVDY RSVNGTLTFN PGDLEREIAV PVLPDAATAI DLRLRVVLTS AAGANLARGI AVGTIRPAAG IATATFTPTP TPSATPTRTL SPAPTNTLTP VPPTPTNTFT PVPPATPTNT FTPVPPATPT NTFTPVPPTP TETPTPTPTE TLTPTPTETP EPVNLTLTAP SSVAVTGGAA APWTNIAGVV IGGVSAGDTV TVTLSIAGVD PSNNAGQMRI TGIGGFTETT APQTFTTTRA DANDRLTRLQ YRRGQPGAAR MTITVVHGSG QSRTVQIDLI ISAP
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