Gene RoseRS_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1672 
Symbol 
ID5208629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2057226 
End bp2059910 
Gene Length2685 bp 
Protein Length894 aa 
Translation table11 
GC content65% 
IMG OID640595280 
Productforkhead-associated protein 
Protein accessionYP_001276014 
Protein GI148655809 
COG category[R] General function prediction only 
COG ID[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGA ATGATCCGTC TGTGCCGGAT ACGCCGCCCA ATCCATATGC CACACGCGCT 
GTCTCCGCTT CAGAGGGCGG TAGTGCCGCG TTCGTCGCTC TGCTCGATGC GCGGGGCCAA
CCGACGCAGT ATGCCGAAGT CTCTTCCGAT GGCGTCACGA TCGGGCGTCT CAAGGGCAGC
GATCTGGTGC TCGACGATCC CACCATCTCG CGCAATCACG CGCGGGTGGA GTGGGATGGA
CGTCACGCCA GGGTGACCGA TCTCGGGTCG AAACTGGGCA CGTTCCTCGG CGCTGTGCGT
CTGATGCCGC AAACGCCTTA TGAGTGGTCG CCTGATCAAC CGCTGCGCAT CGGTCGCTAT
GTATTCCGGC TGTATCCCGG CGCCCTCCCA CCGGCGGCAG TGACTGCACC TTCTGCTTCT
CCTGTTGCCG GGTCAGGTCG CCCCGAAGCG ACAGCTGGCG TTTCTTCCGC TGTTGCTGAG
GCGCCGACCG GTCGCCTGCC GCCGCCTGAG CCATTGCAGG GTGAGGCTGA ACCGGCGCCT
GCCCCGATTG CGCTTTCGAT TGCGCCGGAG CAGGTTACGC TGACGCTCGT GCCGGGGGAA
CGCGCCAGCG TCAATGTGCG CGTCAGAAAC AACACCACGC TACCGCTCAC GATTTCGCTG
ACCATCGATG GTTTTCCATC GGAGTGGGTC GATGGCATGC CCACGCTCTC GGTGGCGCCC
GGGGCGCAGG CATCGGCGAC CCTGACAGTC TCTGTGCCGG CGGCCAGCGC AAGTCTCGCG
GGCGCGCGTC CGGTTTCGAT TCAGGCATTT GCTGCCGAAC TGCCGACGCT CATGTTCGAG
GCGCCGCTCG AATGGCATAT CGCCCCCTTT CTGGCTGGTG AACTGGCAAT CACGCCGAAG
CGCGCCTCTG GTCGCGATCA GGCGGTGTAT ACCATTCAGG TGCGGAACAA TGGCAATGTT
CAGGCTGCGT ATGTGCTGAG CGCCGCCGAC GAGCCGCAGG AACTGGAATA CTCCTTCGCG
CAGGAGCGTG TGAGCGCTGC GCCCGGCGCA ATCGCCGAAA CATCGCTGAC CGTGATTGCC
CGACGTCGCA TGTTCGGCGC CGATCGACGC CATACCTTTA CCGTTCAGGC GGTCGAGACC
GATGTGCAGC AATCGATGCG CGACATATTG AGCGCGCAGG CGCTGTTCGT TCAGACGGCG
ACATTTCCGC TCTGGTTTGT GCCGTTGATC ATCGGGTTGC TCCTCTTCGG ATTGCTATGC
GGTTTCGCAG TTCTCCCGGC ATCGCTTGCC AGCGCGTTGC CGGGGTACGG CATCTTTGCC
GCTCCCACCG AACCGCTCCC TGATACCCGT GGGACCGCCG TGGCGCAGGC GACGGCGACT
GCGCAGCAGT TGCAACTCAC GGAGCAGCAG GGGCTGGCGA CGATTGCAGC GCTGGAGCAG
ACTGCGACTG CCGCGTCCGC CGATCAGCGC GTCGAATTTC AGGCGACGCT GGTGGCACAG
TTCGCCACTG CGACCGCGAT TGCGATCCAG TTTACGTCGC TGCCAACGCT GCCGCCGCCG
ACAGAGGCGC CATTTGCGAC GGTTCCCCCC GGTACAGCGC CAGCGCCCAC GGTGACCATG
CCACCGGTTA CTCCTTCGGC GACGGCAACG CCAACGCGAA CACCATCACG CACACCGGCG
CCATCACAGA CCCCGGCGCC CGGTCTGCCG CAGGCGACCA TCGAGGATGC GACGGTGCAA
CGCCTGACGA GCGGCGAAAC GTCGCTGATC TTCCGGGTGC GCCTCTCGAA CGCAAGCGCT
TCGATTGTTT CGATTGCGTA CACGACGGAG GATGATACAG CGCGCGCGGG GGTCGATTAC
CGCAGTGTGA ACGGAACATT GACCTTCAAC CCCGGCGACC TCGAACGGGA GATCGCCGTT
CCGGTGTTGC CCGATGCTGC CACGGCGATC GATCTGCGCT TGCGAGTCGT TCTGACGAGC
GCCGCGGGCG CCAATCTTGC CCGGGGCATC GCTGTCGGGA CGATTCGCCC GGCTGCCGGG
ATAGCAACTG CCACGTTCAC GCCCACGCCG ACCCCATCGG CGACGCCGAC CAGGACGCTC
TCACCAGCGC CGACCAATAC CCTGACGCCG GTTCCGCCAA CGCCGACGAA CACCTTCACG
CCAGTTCCGC CAGCGACGCC GACGAACACC TTCACGCCGG TTCCGCCAGC GACGCCGACG
AACACCTTCA CGCCGGTTCC GCCAACGCCA ACTGAGACGC CGACTCCGAC GCCGACCGAG
ACGTTGACTC CAACGCCGAC TGAAACCCCC GAACCGGTTA ATCTGACCCT CACTGCGCCG
TCGTCGGTCG CTGTTACCGG TGGCGCTGCC GCGCCCTGGA CGAATATTGC GGGGGTGGTG
ATCGGAGGCG TTTCTGCCGG TGATACCGTC ACCGTGACGC TCAGCATTGC GGGAGTGGAT
CCATCGAACA ATGCAGGGCA AATGCGCATC ACCGGCATTG GCGGGTTCAC CGAGACCACT
GCTCCGCAAA CGTTTACGAC CACCCGCGCC GATGCCAATG ATCGACTGAC GCGCCTTCAG
TACCGGCGTG GTCAGCCCGG CGCGGCGAGG ATGACGATAA CCGTTGTTCA TGGCAGCGGG
CAGAGCCGGA CGGTGCAGAT CGATCTCATT ATCAGTGCGC CATAA
 
Protein sequence
MAPNDPSVPD TPPNPYATRA VSASEGGSAA FVALLDARGQ PTQYAEVSSD GVTIGRLKGS 
DLVLDDPTIS RNHARVEWDG RHARVTDLGS KLGTFLGAVR LMPQTPYEWS PDQPLRIGRY
VFRLYPGALP PAAVTAPSAS PVAGSGRPEA TAGVSSAVAE APTGRLPPPE PLQGEAEPAP
APIALSIAPE QVTLTLVPGE RASVNVRVRN NTTLPLTISL TIDGFPSEWV DGMPTLSVAP
GAQASATLTV SVPAASASLA GARPVSIQAF AAELPTLMFE APLEWHIAPF LAGELAITPK
RASGRDQAVY TIQVRNNGNV QAAYVLSAAD EPQELEYSFA QERVSAAPGA IAETSLTVIA
RRRMFGADRR HTFTVQAVET DVQQSMRDIL SAQALFVQTA TFPLWFVPLI IGLLLFGLLC
GFAVLPASLA SALPGYGIFA APTEPLPDTR GTAVAQATAT AQQLQLTEQQ GLATIAALEQ
TATAASADQR VEFQATLVAQ FATATAIAIQ FTSLPTLPPP TEAPFATVPP GTAPAPTVTM
PPVTPSATAT PTRTPSRTPA PSQTPAPGLP QATIEDATVQ RLTSGETSLI FRVRLSNASA
SIVSIAYTTE DDTARAGVDY RSVNGTLTFN PGDLEREIAV PVLPDAATAI DLRLRVVLTS
AAGANLARGI AVGTIRPAAG IATATFTPTP TPSATPTRTL SPAPTNTLTP VPPTPTNTFT
PVPPATPTNT FTPVPPATPT NTFTPVPPTP TETPTPTPTE TLTPTPTETP EPVNLTLTAP
SSVAVTGGAA APWTNIAGVV IGGVSAGDTV TVTLSIAGVD PSNNAGQMRI TGIGGFTETT
APQTFTTTRA DANDRLTRLQ YRRGQPGAAR MTITVVHGSG QSRTVQIDLI ISAP