| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1654 |
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| Symbol | |
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| ID | 5208611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 2030058 |
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| End bp | 2032982 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640595262 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001275996 |
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| Protein GI | 148655791 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00486103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0226395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTC GACGTGCTTC CCCGATCAGG CGCCTTGAGA AAACCGGTCA TCACGAGATT
GTGCGGCGGA CGTCGCCAAC CGATGATGCT CCGACCGGTC ATCGGTTCAG CCATGATTTT
CGTCAGGTGC GTCTCAGCAG CGCAGAACCG CCTGTGACGT TCGAAGCGGA GACGGAGGAA
GCGCAGCAAG GGGAATCGTT GCAGTCGGAA GAGGTTGAAG CGACCCGAAC TCATCCGACG
CAAAGAGTGT TGTCGGGTTC CTGGTTGGTG CAACGTCAGG AGGGTGCGTC AGGTTCGGCT
TCGATATTCG ATGAGATTAC CGCTGAAGCA GCAGCGTTGC GACCAGGATT GCCCACTACG
TTTGCAGACT ATCGTCAACG CATTCAGAGC GCAACATTTC TAGGTGTGAG CATCTCTGGC
GGCGTTGATC AGGAAATGGC GGGTGTGTTA CAGCGTGCTG AGCGGGAACT GAACTTTACA
CCGGGTTCGC GCAATCAGCA CGGGGTCTAT CAGATTGGCG GGATGGATGC CAGTCGGCTC
CACGGTTTGC ATTCATGGGG ACTGGCAATC GATATCAATA CACCAACCAA CCCCTACATT
ATGCACGAAG CCGGTGAGGC GCAACTCGAT CAACAGCTGG CGCCGGTTTA TGATCGCATT
GCCTGGTTTA TTCTGGGGAG AAGCTCGGTT ATTCCCCGGC AGATCCAGCA GTCATCCGGT
GGTTCACGCG AACAACGGAT TGGCGACATG TATGATCGTC TGGCAGAAGA AAGTCAGGCG
ATGCAAACCT ATTTCCGCTA TATGCAGAAT GTCGCGGAAC TGGAACAGTA TCTGAGCACC
CCTGAGGGAT ACGAACGCTA TCTGCTGATC ACGCACACAA CCGAGCCGGA CCGCTCGATG
CCGCCTGATA TTGAGGCATT GCGCCGACAG ATGATGGCAG ATTTTGCAGT GTTGACATCG
CGTCCTGGAC CGGTCATTCA ACCCATTGAG AATGAGCAGG CTGGCGCATC GGTTGCTCCA
CCGCTCACAT ATCCACATCC TGAACGCCTG GAGGGACGAC AGGATCGCCC ATTTGATCGT
GGCGGATCGA GGCGCACACC GCTGCGAGGG TTTCTTGACC TGGAACGTGA GGTGGTGATG
GCGCTGACGC GCGCCGGATT GCGCTGGGGC GCCTGTGAGT TGGGTGCAGA GAGTGGCGAC
ATCATGCACT TTGATATGGC GCTCCAACCG CTCGGTCAGG CGGTTTTTCA GGCAATCCGC
ACTGTCAAAG CGCGTCATCG CTCTTCGGCT CGTCCTGCGC AACGTATGAC TGCATCGAGT
GGCGATGCCG TTCCTGATGT TTCACCCGCT ATCGAGTCGG ACATTGACGC CATGCGTGGC
GGCGGCGCTC CGCTCGATCC GACGACGCGC GCCTTCATGG AGCCGCGCTT CGGGCACGAT
TTCAGCCGGG TGCGGGTGCA TACCGATGCG CGCGCCGCAA CCGTCGCGCG GTCGCTCGAC
GCGCTGGCGT TCACCGTCGG CGACGACATC GCCGTTGCGC CGGGGCAGTA CCGACCGGGA
AGCGACGAAG GGCGGGCGTT GCTGGCGCAC GAGTTGACCC ACACCATCCA GCAGACCGGC
GGCGCGACGC GGGTGCAGCG GCAGGAGAAC GTGAACACCG GCAGCCCATC GACAGGCAAC
GGTTCGTCAC CGGGTAGCGG GCGACGCATG ATCAGTTATG GCAGCCAGGG GCAGGATGTC
GCCGATGCAC AGCAGTTGCT CAACCAGCAT GGCGCTGCGC CGCCGCTTGT GGTAGACGGC
ATCTTCGGAC CGAAAACACG CCAGGCGACG ATTGAGTTCC AGAAGTCGCG CGGTCTCGCG
CCCGACGGCA TTATCGGACC ATTGACATGG GGGGCGCTGG AATCGGGAGC GCCGCAACCG
CAACCGCCAG GACCGCAACC GCAACCGCCG GGACCGCAAC CGCAACCGCC GGGACCGCAA
CCGCAGCCGG TCGAACGCTG GACGAACGAA GACCGGACGA TGATCGCCGC GCATATCCAG
CCTGGTGTGT TGACGGCATA CCAGGCGTCG CGGATCGAAC CGGCGGTGAT GGCGCTCGCT
GATGCGGAAT ATACCAGTTT TCGCGCCCTG CTCCAGAATG CCGGTTCCGC TATGGAACGC
GCCTTTCTGT GCAAGGCGCT GGCGGCAGGG CGTTCACTGA GTGATATAAC CGATTTCGCC
GCCACAATCC ACGGCATGAG CGACAACTGG TTGCTGCGCA ATCTGAATGT CGTAGACCTG
AACGAAGCGG ATGGCGTCGA GCGCGGCATT ATTCAGCAGT ACGGCAACAG TTGCGGTCCC
ACGTCGGTGC AGGTCATCCG CGCTTCCGCC GACCCGATCT ATGCGCTGGC GCTGCGTTCC
GCCGGTCCGA TCGAGCAGGC TTCGGAACAT GCGGTCAGTG CGCCCGACAC CATTCCAAAC
CAGATGCTCG CCGGCGAACA GAAAGCCATT CTCGACACCC ATGCTGCGAC AGGAACCGGC
AATCCGGCGA CCGACCGCAC CCAACCCACC GGCGGCGCCT GGGTGGAAGG GGAAATGAAT
GCGCTTGCCA GCGCCACCGG GGTTACATAC CAGACACGGA TCGTCGGAAC GCAGATCACG
CTCGATGCGG CACTCGATGT GCTGCGGACC AATCTGACCG CCGGCATTTT CGTGCCGATT
GTCGTTGGCG GCAGTGTTGG CGACACGGCG CACTATGTGA TGGCGATGGC AATCAGCGGC
AACCGTATCC AGATCCACGA TGTCGCCACC GGCGACACCA TCTGGCGCAC TGAACAGGAG
TTCAAGGACA GCGCGCTCAA TCTGCCGAGT GGACACAAGA TGCTGACTGC CATCGACGTG
CCGACCGCTG TGCCGACGAC GCAACCGCAA CCTGCAACGC CGTGA
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| Protein sequence | MTVRRASPIR RLEKTGHHEI VRRTSPTDDA PTGHRFSHDF RQVRLSSAEP PVTFEAETEE
AQQGESLQSE EVEATRTHPT QRVLSGSWLV QRQEGASGSA SIFDEITAEA AALRPGLPTT
FADYRQRIQS ATFLGVSISG GVDQEMAGVL QRAERELNFT PGSRNQHGVY QIGGMDASRL
HGLHSWGLAI DINTPTNPYI MHEAGEAQLD QQLAPVYDRI AWFILGRSSV IPRQIQQSSG
GSREQRIGDM YDRLAEESQA MQTYFRYMQN VAELEQYLST PEGYERYLLI THTTEPDRSM
PPDIEALRRQ MMADFAVLTS RPGPVIQPIE NEQAGASVAP PLTYPHPERL EGRQDRPFDR
GGSRRTPLRG FLDLEREVVM ALTRAGLRWG ACELGAESGD IMHFDMALQP LGQAVFQAIR
TVKARHRSSA RPAQRMTASS GDAVPDVSPA IESDIDAMRG GGAPLDPTTR AFMEPRFGHD
FSRVRVHTDA RAATVARSLD ALAFTVGDDI AVAPGQYRPG SDEGRALLAH ELTHTIQQTG
GATRVQRQEN VNTGSPSTGN GSSPGSGRRM ISYGSQGQDV ADAQQLLNQH GAAPPLVVDG
IFGPKTRQAT IEFQKSRGLA PDGIIGPLTW GALESGAPQP QPPGPQPQPP GPQPQPPGPQ
PQPVERWTNE DRTMIAAHIQ PGVLTAYQAS RIEPAVMALA DAEYTSFRAL LQNAGSAMER
AFLCKALAAG RSLSDITDFA ATIHGMSDNW LLRNLNVVDL NEADGVERGI IQQYGNSCGP
TSVQVIRASA DPIYALALRS AGPIEQASEH AVSAPDTIPN QMLAGEQKAI LDTHAATGTG
NPATDRTQPT GGAWVEGEMN ALASATGVTY QTRIVGTQIT LDAALDVLRT NLTAGIFVPI
VVGGSVGDTA HYVMAMAISG NRIQIHDVAT GDTIWRTEQE FKDSALNLPS GHKMLTAIDV
PTAVPTTQPQ PATP
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