| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1638 |
|---|
| Symbol | |
|---|
| ID | 5208593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 2009824 |
|---|
| End bp | 2011371 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640595244 |
|---|
| Product | putative adenylate/guanylate cyclase |
|---|
| Protein accession | YP_001275980 |
|---|
| Protein GI | 148655775 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.739692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA TCACTCTCGA CATCAACGGC GAGCACAAGA CCTACCCGAT CGAAGCGCGC
GGGTTACGCA TCGGGCGTGC GCTGGAGAAC GATATTGTGC TCAACCACGC GATTGTGTCG
CGCTACCATG CAGAAATCGT CGTGAATGGG CGCGATGTAT GGGTGCGTGA CACCAACAGT
CGCAACGGCG TCTTCGTCAA CCGGTTGCGG ATCAAAGAAG AGCAACTGCG CGACGGCGAC
GTGGTTCAGA TCGGTCCGTT CGAACTGCGC TTCGAGGAAC GCGCAGCACA GAACGTCGTT
CTCGATGATA GTCGCTACTT CCCGGTTGCA TCTGAGGCAA GCGGCGTCGT CGTACCAGAA
CTGAACATCG ACCTGCGCGA GTTCTTCCGC ATCGCCAGGC GCCTCAACCT GATCATCGAT
ATGGGCGAGT TGCTCGACGC AATAGTCGAA GAGGTGCTCC GTCTGATCCC GGCGCAGCGC
GCCCTGCTGC TGCTGAAACG CGAGAATGAA CTCGTGCCGC GGGTCATCTA TCCGCCGTCG
CGCCAGGAGG TGGTCATCAG TTCGACTATC GTTCGCAAAG CGCTCGAAGC TGGCGAAGTG
GTGCTCACCC GCGACGCACG CCTCGAAATT GGCGGCACCG AAAGCATTAT CAGTGCGAAC
ATTCGCTCGG CGCTGTGCGC CCCCCTCCTG GTGGAACAGG GCGCAATCGG GCTGATCTAC
CTGGACTCCC CCGGACGCGA CCGGTTCGGT TCACGTGAGC GCGACCTGCT GGCGGCAATC
GCCAACCAGG CGGCGGTCAC GATTGAGCGC GCCAGGCTGA CGGAAGAACT GCGAAAACAG
GAGGCCAGTC GCCAGTTGTT CGAGCGCTTC GTCTCCCCCA GCGTGGCGCG CGATGTTGCC
AGTTACTTCT CCGAACACGG TCGCCTGCGT GAACCGCAGG AGTTGATCGT GAGCGTTCTC
TTCGCCGATG TCAAGGGATT TTCATCCCTC TCCGAGCGCC TCTCGCCGCG CGAAGTGCAG
GACCTGCTCA ACGAGTACCT CCACGAAATG ACCGAGGTTA TCTTCCAGCA CAACGGCACG
CTCGATAAAT ATATCGGCGA TGGGATTATG GCGATCTTTG GCGCGCCGCA GGTGAACGAA
TACCAGGATT ATCACACCAC CGCCATCCAG GCGGTCGATG CTGCGCTTGA CATGATCGAA
GCGCACCGTC GCCTGATCGA AAAACTCGAT CCGTCCAAAG CATTCGACTT TCGCATTGGC
ATCAACACCG GTCCGGTCTA CGCCGGCTTT TTCGGCACCC GTCAGCGCCT GGAGTACACG
GTGATCGGTG ATACCGTCAA CACTGCGGCA CGTCTTGAAA GTCGCGCCGA TCTCAATTCG
GTGCTGATCT CCGAAGCGAC GCGCAACGCT ATCGGGGATG CGTTCATTCT CCAGGAGATG
GGCGATTACC AGTTGAAGGG CAAAGCGCAA CTCGTTCACA CGTATAAAGT GATCGGTCGC
GCACCGGCGC GCCGATCCCG CGCGATCGGT TCGATGAACG CGCCGTGA
|
|---|
| Protein sequence | MALITLDING EHKTYPIEAR GLRIGRALEN DIVLNHAIVS RYHAEIVVNG RDVWVRDTNS
RNGVFVNRLR IKEEQLRDGD VVQIGPFELR FEERAAQNVV LDDSRYFPVA SEASGVVVPE
LNIDLREFFR IARRLNLIID MGELLDAIVE EVLRLIPAQR ALLLLKRENE LVPRVIYPPS
RQEVVISSTI VRKALEAGEV VLTRDARLEI GGTESIISAN IRSALCAPLL VEQGAIGLIY
LDSPGRDRFG SRERDLLAAI ANQAAVTIER ARLTEELRKQ EASRQLFERF VSPSVARDVA
SYFSEHGRLR EPQELIVSVL FADVKGFSSL SERLSPREVQ DLLNEYLHEM TEVIFQHNGT
LDKYIGDGIM AIFGAPQVNE YQDYHTTAIQ AVDAALDMIE AHRRLIEKLD PSKAFDFRIG
INTGPVYAGF FGTRQRLEYT VIGDTVNTAA RLESRADLNS VLISEATRNA IGDAFILQEM
GDYQLKGKAQ LVHTYKVIGR APARRSRAIG SMNAP
|
|---|
| |