| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1612 |
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| Symbol | |
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| ID | 5208567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1972707 |
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| End bp | 1975379 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640595218 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001275954 |
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| Protein GI | 148655749 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00746947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.786698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTG CCGACACCCA GGCGTTGCTT GCCGATCTGT CTACGCGGCT CGGACCTGAT
CGCGTGATTG TGGATCCGGC TCAACTCATC ACCTACGAAG TCGATGGCAG TTTTGACCGT
GGTCATCCCG ATGGCGTTGT CTTCCCCCGT TCGGTCGACG AGGTGGTGCA ACTGGTGCGT
TGGGCTGCCC GGCATCAGAT ACCGCTCATC GCGCGCGGAT CGGGAACCGG TCTGGCAGGC
GGCGCCGTCC CCGAACACGG CGGCGTGGTG GTGCAACTCG GGCTGATGAA CCACGTGCTG
GATATCGATC TGACCGGTCG CAGCGCAGTG GTCGAAGCCG GCGTGGTCAA CCTGATCTTC
GATACCCGGG TGCGTCAGCA TGGTCTGTTC TTTCCCCCCG ATCCCTCCAG CCAGCGCACG
GCGACCATCG GCGGGAATAT CGGTACGAAT GCGGGCGGAC CGCACTGTTT CAAATATGGT
GTCACCAGCA ACTATGTGAC CGGTGTGGAA GTGGTGCTGA GCGACGGGCG GATCATTCAT
ACCGGTGGGC GGGCGCTCGA TATACCGGCT TACGACCTGA CGGCGCTCTT CGTCGGCAGT
GAAGGCACGC TGGGCATCAT AACACGCGCC GATCTGCGCC TGCTCCGCGA TCCGCCAGCG
GTGCGCACGC TCCTGGCTGC CTTCGACAGC GTCGAGCAGG CGGGAAAAGC GGTATCTGCA
ATTATTGCAC GCGGTCTGGT GCCAGCGACG ATGGAGATGA TGGATTCGAG TATTGTACGC
ATTGTTGAGG AGTATGCACA TCCTGGATTA CCGCTCGATG CTGGCGCCGT GTTGATCATT
GAAGTTGACG GCTATCCTGA AAGCGTTGGA CCGCAGATCG CCGAGATTGA AGCAACCCTG
CGCGACTGCG ACGTGCGTGA GGTGCGGGTG GCGCAAAGCG CCGCAGAGCG TGATCGGATC
TGGTTCGCGC GCAAGAGCGC CGCTGGCGCT ATGGCGCGTC TGGCGCCAGC ATACTATCTG
GTCGATGGCA CCGTGCCACG CAGCAAACTG GCGGAAACCC TGGCAGCGGT GAACCGGATC
ATCGAAGCTG ACGGCTTCCG CACCGGTCAT GTCTTTCATG CCGGTGACGG CAATCTGCAT
CCGCTCATCC TGATTGAAAA TCCCTCGGAT CGAGCGTTGA TCGCGCGGGT GCTCGAAACC
GGTCGCAAAA TCCTGGAAGT CTGCGTTGCG GCTGGTGGCA GCATCACCGG CGAACATGGC
GTCGGCATCG AGAAGCGCGC ATTCATGCCG CTGATGTACG GCGCTACTGA ACTGTCACTG
ATGTGGGATG TGAAGGATAT TTTCGACCCG ACCGGCATGA TGAACCCCGG CAAGGTGTTG
CCGCCGCGTG ACGAGGTGAT GGCAGGGTTG CACAATGCGC AGGAACCGCA ACCGGGGCGT
ATGTCACCGG CAGCGACCGG GTCGCTGAGC GAATCTGCAC CCACTGCGCC TGTGCTCATC
GCACCGGAAA GCGCGGAGGA AGCAGCGGAG AGATTACGCG ACCTGACCAG TGCGGGGCAA
AGCGTGCGCA TTCGGGGGGG CGGAACGAAA TCAGCCCTGC TTCCGCCAGC CGATGCGGTG
GTATCCACTG CACATCTGTC AGGCATTCGC GTGCTTGCGC CTGATGATCT GTACATTACT
GTCGGCGCAG GTACATGTCT GGAGGAACTC CAGAAGGCGG TGCACCCCTA TGGGATGTGG
GCGCCGATAG CATCTCCCTG GTCTACCGCG ACGATTGGCG GTACGATTGC CGCCAACCTG
AATGCGCCAC TGCGCATGCG TTACGGCAGT CTCCGCGATC TGATACTGGC GGCGACGGTT
GCGCTCCCCA ACGGTCGCGT CGCCCGCATT GGACGACCGG TTGTCAAGAA TGTCGCCGGA
TACGACCTGC CGAAAGTGCA CGTCGGAGCA CATGGCACAC TGGGGTTGCT CTGTGATATA
ACCATCAAAC TGACGCCATT GCCGCGGATG CGGGCAACAC TGATCGCTGC ACCGCGCCGG
ATCGCGCAGG CGCTCGAAAC CGGTGCGAAA CTGGCGCAAC ACTCCCTGAT CGCCTCTGCG
GTGCTGCTGC TGGAGGTCGC CGATGATGGA CGTTGGGCGG CGTCGCTCCC GGTCAGCCTG
GATCGCCGCC CAATGACGCT TCTGGTCTAC ACTGCCGAAG GTCTGGCGGA AGACGTGGCG
GCAGAACTCG CCGCCGTGCG CACCGTCCTG CGCAACGCTG GCATACCGGC GCTGCAGATT
GAGGATCCGT CGGGCAGCGA CCTGTGGGGC GCCTTCCTCA GCGCAGCGCA ACCGGACGAT
CTGATGGTGC GGATTGGCGT CGCCCCCAGG GATATTGGGG CGCTGCTGCA ACGCGCCGGT
TTTGGCGGGC AAGAGTCGTA TGTAGCGGAT GTGGCGGCTG GACAGGTGTA TGTGCGCGCG
CCGGCGCCGC ACCCGGATGA CGCCGGACGT ATTCTGGAGC GTCTGCGCAC GGCGGCGCGA
ACCCTCGGCG GCTATGCAGT GGCGCTGGCG GCGCCGGCGC GCGCGCGCAT CGACCGGTGG
GGTTTCACTC CCGATGCACT CGATAAAATG CAGGCGCTCC GACGGCGATG GGGAGCGGAT
GGGTTGCTCA ATCCGGGTGC GTTCCTGGTC TGA
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| Protein sequence | MTTADTQALL ADLSTRLGPD RVIVDPAQLI TYEVDGSFDR GHPDGVVFPR SVDEVVQLVR
WAARHQIPLI ARGSGTGLAG GAVPEHGGVV VQLGLMNHVL DIDLTGRSAV VEAGVVNLIF
DTRVRQHGLF FPPDPSSQRT ATIGGNIGTN AGGPHCFKYG VTSNYVTGVE VVLSDGRIIH
TGGRALDIPA YDLTALFVGS EGTLGIITRA DLRLLRDPPA VRTLLAAFDS VEQAGKAVSA
IIARGLVPAT MEMMDSSIVR IVEEYAHPGL PLDAGAVLII EVDGYPESVG PQIAEIEATL
RDCDVREVRV AQSAAERDRI WFARKSAAGA MARLAPAYYL VDGTVPRSKL AETLAAVNRI
IEADGFRTGH VFHAGDGNLH PLILIENPSD RALIARVLET GRKILEVCVA AGGSITGEHG
VGIEKRAFMP LMYGATELSL MWDVKDIFDP TGMMNPGKVL PPRDEVMAGL HNAQEPQPGR
MSPAATGSLS ESAPTAPVLI APESAEEAAE RLRDLTSAGQ SVRIRGGGTK SALLPPADAV
VSTAHLSGIR VLAPDDLYIT VGAGTCLEEL QKAVHPYGMW APIASPWSTA TIGGTIAANL
NAPLRMRYGS LRDLILAATV ALPNGRVARI GRPVVKNVAG YDLPKVHVGA HGTLGLLCDI
TIKLTPLPRM RATLIAAPRR IAQALETGAK LAQHSLIASA VLLLEVADDG RWAASLPVSL
DRRPMTLLVY TAEGLAEDVA AELAAVRTVL RNAGIPALQI EDPSGSDLWG AFLSAAQPDD
LMVRIGVAPR DIGALLQRAG FGGQESYVAD VAAGQVYVRA PAPHPDDAGR ILERLRTAAR
TLGGYAVALA APARARIDRW GFTPDALDKM QALRRRWGAD GLLNPGAFLV
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