Gene RoseRS_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1588 
Symbol 
ID5208543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1941297 
End bp1942163 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID640595194 
Productphosphonate metabolism PhnJ 
Protein accessionYP_001275930 
Protein GI148655725 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3627] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAT CTCTTGACCG GTTATACAAT TTTGCCCTGC TCGATGAAGA CGCGAAGCGC 
GAGATCCGGC GCAGCCTGCT GAAAGCCGTG GCGCTGCCCG GTCACCTGGT TCCGTTCGCC
AGTCGCGACC TGCCGATTGC CCGCGGTTGG GGCACCGGCG GGCTTCAGAT CACCATGTCG
ATCATTACCC CGGACGATAC GCCGAAAGTG ATCGATCAGG GTGACGACGA TAGTGTGAAT
GCGGTCAATC TGCGCCGCCT GATCACGCGC ACAACCGGCG TTAACACAAC GGTCGATACT
GCCGAAGCCA CGATCATTCA GACTCGCCAC CGCATTCCAG AAGAGTCGCT GCGCGCCGAC
CAGATTCTGG TCTTGCAGGT GCCGATGGCC GATCCGCTGC GCTGGGTCGA GCCGAATCTG
GAGCGGGCGA CGGTTATGCA CAGTGAGGCC AATTACGGCA AGATGTGGGT CTATATGTAC
GAAAGTGTCG TGCGGGCCGG CGACCTGCGG ATTGCCAGTC AGTATCCGGT GCTGGTGAAC
CGCCGTTATC TCATGGATAG TACGCCGATT CCGCGCTGGG ATGTGCCCAA ACTCCATATG
GCCGAGACGT TGTATCTGTT TGGCGCAGGT CGTGAAAAGC GCATCTATGC CGTTCCTCCG
TACACAATCG TGGAACCGCT CCAGTTCGAC GACTACCCTT TTCGCACCGA ATACCAACCC
GGTCAGCGCT GCGCCCGTTG CGGCGCGGAG CACACGTTTC TCACGCATCA TTTTGTCGCC
GACGCCGGCG GCGGGCGTTG GGAAGCAACC TGTTCGGATA CGGCATATTG CGCCAGGCGG
CGCGCACAGG CGGAGGCGCT GCTATGA
 
Protein sequence
MSTSLDRLYN FALLDEDAKR EIRRSLLKAV ALPGHLVPFA SRDLPIARGW GTGGLQITMS 
IITPDDTPKV IDQGDDDSVN AVNLRRLITR TTGVNTTVDT AEATIIQTRH RIPEESLRAD
QILVLQVPMA DPLRWVEPNL ERATVMHSEA NYGKMWVYMY ESVVRAGDLR IASQYPVLVN
RRYLMDSTPI PRWDVPKLHM AETLYLFGAG REKRIYAVPP YTIVEPLQFD DYPFRTEYQP
GQRCARCGAE HTFLTHHFVA DAGGGRWEAT CSDTAYCARR RAQAEALL