Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1583 |
Symbol | |
ID | 5208538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1935821 |
End bp | 1937479 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595189 |
Product | ATP dependent DNA ligase |
Protein accession | YP_001275925 |
Protein GI | 148655720 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACGC ACATACCTGT ATTTATGCAC ACATTTGCAC AACTCTACGC CACACTCGAT GAAACCACCC GAACCAGCGT GAAAATCGAG GCGCTGACGC GCTACTTTGA GCGCTCAGAA CCGGCTGACG CTGCGTGGGC GATCTTTTTC CTTATCGGTC GGCGAGTGCG GCAGGCTGTG CCTTTGCCAA CACTGCGCGC CTGGGCAGTC GAAGCGGCTG GCATTCCCGA CTGGCTCTTC GGCGAGTGTT ACGATGCCGT CGGCGACTTT GCCGAGACGG TCACGCTGCT TCTGCTGGAG CCGGACGAGT GGACGGTGGA CGTCGACCGT TCCGTTCTGC CGTTTGAAGG TCCACAACCA CTCCACCGCT GGGTTGAGGA GGTGCTGCTC CCCCTGCGCG ACCAGGACGA AACGATGCAA CGCGCGATTG TGCAGGCGGT GTGGGCGACG CTTGGCGGAA CAGAACGCTT TGTATGGAAC AAATTGATCA CCGGTGCATT TCGGGTTGGC GTCTCACAGC AACTGGTGGT GCGCGCGCTT GCCCGTGTCA GTGGCGTCGA TTCGTCCACG ATTGCGCATC GTCTGATGGG TGAATGGACC CCGTCGGAGA CATTCTACCG GACGCTCCTG GCGCGTGACA CAACCGACGC CGATGTGAGT CGGCCCTACC CCTTCTGTCT GGCGCACCCG CTCGATGCCG ATCCCGAAAC CCTCGGACCA ATCGATGAAT GGCAGGCGGA GTGGAAATGG GACGGCATCC GGAGTCAGTT GATCCGCCGC GCCGGGCGGA CATTTCTCTG GTCGCGCGGC GAGGAACTGA TCACCGACCG TTTCCCCGAA ATTGCAGCGA TTGGCGCGCT GCTCCCCGAT GGCATCGTCA TCGACGGCGA GGTATTGCCT TGGAAGGATG GCGTCGTGCT CCCCTTCGCG CAGTTGCAGC GTCGGATCGG ACGCAGGAAC CTGACGAAGG CTATCCTGGA CGAAGCGCCG GTTGCGTTGC TGGCGTATGA TCTGCTCGAA CTCAACGGCG TCGATGTGCG CAATCAGCCG CTGGAGCGGC GTCGGGCGGA ACTCGAACGC CTGATCGCAA CCTGTGTGCC GGGCAATCAG GCGCTCCTGA TTTCGCCGGT GGTCGTCGCG GCAGATTGGG ACGATCTTGC GGCGCAGTGG GCCACATCGC GCGAACGCAA TGTCGAAGGT CTGATGCTCA AGCGTCGCAG TTCACCGTAC CGTGTCGGGC GGGTGCGCGG CGACTGGTGG AAGTGGAAAG TCGCGCCCTA CACCATCGAT GCGGTGCTGA TCTATGCGCA GCGCGGCAGC GGCAAGCGCG CCAGTCTCTA CACCGACTAC ACCTTCGCCG TGTGGGACGG CGACCGGTTG ACGCCGTTCG CCAAAGCGTA TTCCGGGCTG ACCGACGAGG AGATCCGGCA GGTTGACGCA TTCGTAAGAC GCAATACACT GGAAAAGTTT GGACCGGTGC GCACCGTCAC TCCGGAGCTG GTCTTTGAAC TGGCATTCGA GGGTATTCAG CGCTCGAATC GTCACAAATC GGGAATTGCG GTGCGCTTCC CGCGCATCCT GCGCTGGCGG CGCGACAAGC GTCCGGCTGA TGCCGACACG CTGGAACAGG TGCGCGCCAT GTTGCCAGAG GAATCATGA
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Protein sequence | METHIPVFMH TFAQLYATLD ETTRTSVKIE ALTRYFERSE PADAAWAIFF LIGRRVRQAV PLPTLRAWAV EAAGIPDWLF GECYDAVGDF AETVTLLLLE PDEWTVDVDR SVLPFEGPQP LHRWVEEVLL PLRDQDETMQ RAIVQAVWAT LGGTERFVWN KLITGAFRVG VSQQLVVRAL ARVSGVDSST IAHRLMGEWT PSETFYRTLL ARDTTDADVS RPYPFCLAHP LDADPETLGP IDEWQAEWKW DGIRSQLIRR AGRTFLWSRG EELITDRFPE IAAIGALLPD GIVIDGEVLP WKDGVVLPFA QLQRRIGRRN LTKAILDEAP VALLAYDLLE LNGVDVRNQP LERRRAELER LIATCVPGNQ ALLISPVVVA ADWDDLAAQW ATSRERNVEG LMLKRRSSPY RVGRVRGDWW KWKVAPYTID AVLIYAQRGS GKRASLYTDY TFAVWDGDRL TPFAKAYSGL TDEEIRQVDA FVRRNTLEKF GPVRTVTPEL VFELAFEGIQ RSNRHKSGIA VRFPRILRWR RDKRPADADT LEQVRAMLPE ES
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