Gene RoseRS_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1501 
Symbol 
ID5208456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1827776 
End bp1828294 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID640595110 
Productcopper resistance protein CopC 
Protein accessionYP_001275846 
Protein GI148655641 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.456265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCTC TGACTCGTAT GGTGCGCGTG GGTGTGGTGC TGGTCGCGCT GATAACAGGA 
TTCGTGGGCG CGCGCAGTGC GCTGGCGCAC GCCGACTATG TTTCGTCCGA TCCGCCAGCT
GACGGAACGG TAACCACTGC TCCGGAGCGG GTCGTGATCG TCTTTTCGCA AGAACTGAAG
CCGGAAGGCA ACACCATTCG CGTTACCGAC GCACGAGGCA ATCAGGTTGA TCGCGGTGAT
ACCGCGCTGG ATCGTACCGA CCCGAATCGC AAAACGCTGG TTGTCTCGCT GAACCCCGGT
CTAAGCGACG GGTTGTACAC GGTGAACTGG AAGAACGCCA GCACGGATGG TCACAGCGAG
ACAGGACGCT TCCGCTTCCG GATCAGCAGC GGTACGGCAG CGCCTGCGCC ACTCCCGGCA
ACGTCTGGCA GTGAATTGCC CTGGTTGATC ATTGCGTCGG GCGCAGGCTT GCTGCTGATC
GGAGCGCTGG TGCGCCGCCA CGCATTGCGC TGGTCGTAG
 
Protein sequence
MVSLTRMVRV GVVLVALITG FVGARSALAH ADYVSSDPPA DGTVTTAPER VVIVFSQELK 
PEGNTIRVTD ARGNQVDRGD TALDRTDPNR KTLVVSLNPG LSDGLYTVNW KNASTDGHSE
TGRFRFRISS GTAAPAPLPA TSGSELPWLI IASGAGLLLI GALVRRHALR WS