Gene RoseRS_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1489 
Symbol 
ID5208444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1816020 
End bp1817258 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content65% 
IMG OID640595098 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_001275834 
Protein GI148655629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACG CATTGCCTGG GAGCAGCCCT GCCGACCGGG CTGCTCCTTC CAAACCAGTC 
CTGACTCCGG CGTTGATCCT GCGGAATGGC GGGGCGGCGC TGATCTTCGT CACCCTGCTG
ATCGGCGCGC ACGTGCTTCA GACAACGTCG GGGTATGGCG CGTCGGCGGC GCTCTCGCTG
CTGATCGGCG CCGCGCTCGG GGTTGTCTTT GAGCGTGGTC GGTTCTGCTT CTTCTGCATC
TTCCGCGACT TCATCGAGCA TCGCAACGCC GGACCGCTCT ACGCGATCCT GACGGCGCTG
GCTGTGAGCG GAATCGGGTA TGCCGTCGTG TTCGGCGCGT TTCTTCCCAA TCCGTTCAGC
GGTCGGCTCG CCCCCGATGC CCATATTGGT CCGGTCAGCC TGGCGCTGGT CGTCGCCGGT
TTGTTGTTCG GCGTGGGGAT GGCGCTCTCC GGCGCGTGCA TCAGCGGTCA TCTCTATCGT
TTGGGAGAGG GATCGGGCTA CGCGCCGCTG GCGCTCATCG GCGCATTGAT CGGCTTTGGT
CTGGGATTCC GAACGTGGAA CTGGCTCTAT GTGACGGTGA TCGCCGATGC GCCGGTGATC
TGGCTGCCGC ACTGGATCGG GTACGGCGGG GCGCTCCTCC TTCACCTGGC AGTTCTCAGC
GTCCTGGCGT TCGCGCTGTT GCGCTACGTA TCGCCGCTGC CGCCCCGTCC TGCACATCAA
CTCGACATAA AATATCTTTA TGAGGCGCTC TTCCGCGACC GCTGGAATCC GCTGGTCACC
GGCGCGATCG TGGGAGTCAT CGGGGTCGTG GCGTACCTGC GGGTCGAACC CCTCGGCGTG
ACGGCGCAAC TCGGCAGCCT TGCCCGCACG GTGATGCACA CGAGTGGCAT GCTGCCGGCG
CGACTCAATG GGCTGGACAG TTTCGCCGGT TGCGCCACGC AGGTGGTGCA GACGATTACC
GACAATGGGT GGCTGATCGG CGGACTGGCG CTCGGCGCTT TTGGCGCCGC CCTGATCGCC
GGTCGCTTTC AGCCAGCGTT GCCGCGTGCC AATGGCAGTG TCGCTGCGCT GGTCGGCGGG
GTGCTGATGG GCTGGGGCGC GATGACGGCA CTCGGCTGCA CAGTGGGGAC GCTCCTCTCC
GGGATTGCTG CATTTGCGCT ATCGGGATGG GTGTTTGGCG CGGCGGTCTT TGCTGGTGTC
TGGGGCGGTA TTGTGCTGCG CCTCCATCGC TGGACGTAG
 
Protein sequence
MSNALPGSSP ADRAAPSKPV LTPALILRNG GAALIFVTLL IGAHVLQTTS GYGASAALSL 
LIGAALGVVF ERGRFCFFCI FRDFIEHRNA GPLYAILTAL AVSGIGYAVV FGAFLPNPFS
GRLAPDAHIG PVSLALVVAG LLFGVGMALS GACISGHLYR LGEGSGYAPL ALIGALIGFG
LGFRTWNWLY VTVIADAPVI WLPHWIGYGG ALLLHLAVLS VLAFALLRYV SPLPPRPAHQ
LDIKYLYEAL FRDRWNPLVT GAIVGVIGVV AYLRVEPLGV TAQLGSLART VMHTSGMLPA
RLNGLDSFAG CATQVVQTIT DNGWLIGGLA LGAFGAALIA GRFQPALPRA NGSVAALVGG
VLMGWGAMTA LGCTVGTLLS GIAAFALSGW VFGAAVFAGV WGGIVLRLHR WT