Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1394 |
Symbol | |
ID | 5208346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1703034 |
End bp | 1703504 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595005 |
Product | TadE family protein |
Protein accession | YP_001275744 |
Protein GI | 148655539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000383988 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000800451 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATGCAGA AACAGCGCTA TCTTATCATC AAGGCGGCGA GCGCACTGGC TGGGAACGAG CGCGGCGCAG CAATCATTGA ATACATCGGC TTCTTTCCAC TGGTGTTGCT TGTTCTGGTC ATTGCCTGGC AGTTTGTGCT GGTTGGCTAT ACCGGAATCA TTGCTGCCGG TGCAGCACGT GAAGGTGCAC GCGCCGCTGC GACGCGCGAG AACGTCGACC GTGCGGTGCG GAACGCCAGT CCGGGATTCG ACGGTCGCCG CTGGTGGCAA CCGCTGGCGG GGTATCCGTG CAGCGCTTAC AGCAGCCATC CGGTGACGAT TCAGGTTCAA CTGGAGGTTC CTCACGTGCT GTTTCCATTC GTCGGCAGCC TCGGCAACTA TCCAAAGGTG ACGCAACGCG CTACGGTGCG CTGTGAGCCG CCGCCGATCG CCAGGGTCGA TGTGAATCCT GAGCGGATGC GCGAGGTGTG A
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Protein sequence | MMQKQRYLII KAASALAGNE RGAAIIEYIG FFPLVLLVLV IAWQFVLVGY TGIIAAGAAR EGARAAATRE NVDRAVRNAS PGFDGRRWWQ PLAGYPCSAY SSHPVTIQVQ LEVPHVLFPF VGSLGNYPKV TQRATVRCEP PPIARVDVNP ERMREV
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