Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1393 |
Symbol | |
ID | 5208345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1702602 |
End bp | 1703030 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595004 |
Product | TadE family protein |
Protein accession | YP_001275743 |
Protein GI | 148655538 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000426497 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000776129 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGGAAGTA TGCTCTCACA GCCATCGGTG TTCATCAGGC GATTGACACG TGATGAGTGC GGCGTCGAGT TGATCGAATT CCTGGGATTC GTCCCGATTG CGATGCTTGT AATCCTGATC GCCTGGCAGT TCATCATGGT CGCCTATACC GGTATCGTTG CCGCTGCAGC GGCGCGTGAG GGCGCCCGCG CCGCTGTGAC TCTCGAGGAC GTCGGGCGTG CAGTCATCTG GGCGAGTCCA GGTTTCGACG GTCGTCGTCA GTGGCGCGTG TCGGGGGGGT GCCCCTACTA TGCAGGGAAT GCGGTGACGG TTCAGGTTCA ACTGGAGACG CCACATGTCG TCTTTCCGTT TCTTGGGGCG CTCGGTCGCT ATCCCAGGGT GACTGCTGAG GCGAGTATGC GGTGTGAACC ACCGTTTGAC GCGCCCTGA
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Protein sequence | MGSMLSQPSV FIRRLTRDEC GVELIEFLGF VPIAMLVILI AWQFIMVAYT GIVAAAAARE GARAAVTLED VGRAVIWASP GFDGRRQWRV SGGCPYYAGN AVTVQVQLET PHVVFPFLGA LGRYPRVTAE ASMRCEPPFD AP
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