| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1376 |
|---|
| Symbol | |
|---|
| ID | 5208328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1686316 |
|---|
| End bp | 1687515 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640594987 |
|---|
| Product | ribosomal RNA large subunit methyltransferase N |
|---|
| Protein accession | YP_001275726 |
|---|
| Protein GI | 148655521 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.503977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACC AGGATACCCT GCCAAATCTG TACGATCTGT CGCTGGCGGA AATGGAGCGC
CTGATGACGG CGTGGGGACA GCCAGCCTAC CGCGCGCGGC AGATATTCCG TCAACTGTAC
GTCAACCTGG TCGACTCGCC CCTGGCGATG ACCGACCTTC CCCTGGCGCT GCGGGAACGT
CTGGTTGCCG AAACGCGCCT GGCGCCGCTG GCGCCGGAAC AGGTGCATGT GGCGGACCAG
GGGTTGACGC GCAAGGCGCT CTTCCGCCTG GAGAACGGCG TGTTGATCGA AAGCGTGCTG
ATGATCTACC CCGACCGCGC AACCGTGTGC GTTTCGACGC AGGCAGGGTG CGGGATGGGG
TGTGTCTTCT GCGCTACCGG AACACTCGGA CTGCTGCGCA ATCTGTCACC GGGCGACATC
GTGGCACAGG TCGTCTGGGC AGCGCGCGAA ATGCGTCGCT TTGCCGCCGA ACGTTGCATC
TCACCCTCCC TCGCGCCTCC CGATGATGAT TCCTGGTGGA CGCCGGACAC GCTGGAGGAT
CAGGGATCGT CCGAGGCGCG GAGCATTTCC GTCTCACGAC TGTCGAACAT CGTCTTCATG
GGCATGGGTG AGCCATTTGC GAACTATGAT CGCTGGTGGC GCGCAGTGGA GATTCTCCAT
GATCCACGTG GGTTGAACAT GGGCGCGCGC AGCATGACCG TCTCGACAGT CGGGTTGATT
CCGGGTATTC GCCGTCTGGC GACAGAGACG CTGCCGATCA ACCTGGCGAT CTCGTTGCAC
GCCCCCGATG ATGCCCTGCG CAGCGCGTTA ATGCCGGTCA ACCGCCGTTA CCCGCTTGCC
GCGCTTCTTG AGGCGACCCG CGACTATCTG GCGGCAACCG GTCGGCGGGT CTCATTCGAG
TATGTGCTGT TGCAGGGGAA GAATGATGAA CCGGAGCATG CGGCGAAACT GGCGGCGCTG
CTCCATGGTG AAGCAGGAAC GACGCCATTA CCCCTCCACC TGGTGCACGT CAATCTCATC
CCGTGGAATC CGGTGCCGGG GATGCCGCTG GGACGGTCGG AGCGCCGTCG TGTGCTGACC
TTTCAACGCA TCCTGCGCGA GCGTGGCATC GCCTGCACTG TGCGCGTCGA GCGCGGCGTC
TCCATTGCGG CAGCATGTGG GCAACTGGCG GGGGCGAGGG GGTTGAACGT TGAGTGTTGA
|
|---|
| Protein sequence | MMNQDTLPNL YDLSLAEMER LMTAWGQPAY RARQIFRQLY VNLVDSPLAM TDLPLALRER
LVAETRLAPL APEQVHVADQ GLTRKALFRL ENGVLIESVL MIYPDRATVC VSTQAGCGMG
CVFCATGTLG LLRNLSPGDI VAQVVWAARE MRRFAAERCI SPSLAPPDDD SWWTPDTLED
QGSSEARSIS VSRLSNIVFM GMGEPFANYD RWWRAVEILH DPRGLNMGAR SMTVSTVGLI
PGIRRLATET LPINLAISLH APDDALRSAL MPVNRRYPLA ALLEATRDYL AATGRRVSFE
YVLLQGKNDE PEHAAKLAAL LHGEAGTTPL PLHLVHVNLI PWNPVPGMPL GRSERRRVLT
FQRILRERGI ACTVRVERGV SIAAACGQLA GARGLNVEC
|
|---|
| |