| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1362 |
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| Symbol | |
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| ID | 5208314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1671884 |
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| End bp | 1672657 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594973 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001275712 |
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| Protein GI | 148655507 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA TCCTTGCAGG CAAAGTCGCG CTGATCACCG GCGCCGCCAG CGGCATCGGG
CGCGCCACGG CGCTGACGCT GGCGCGTGAA GGCGCTGCGG TCGTCGTGGC CGACATCGAT
GCACCACGCG GTGCGGAAAC CGTTGCGACA ATCGGCGCTG CCGGCGGGCG GGCGCACTTC
GTGCAGGCGG ATGTCATCCG TGATGCAGAA CGGATGGTCG AAGCCGCAAT GCAGGAATTC
GGGCGACTCG ACATCCTGGT GAACAACGCC GGTATCTTCT ACACCGTCGA TCTGCTCGAC
GTGACCTTCG ATGAATGGGT GCGCGCTGTT GATGTCATGT ACTTCGGCAC ATTTCGTTGC
AGTCAGGCGG CAGCGCGGCA GATGGTTCAT CAGGGAGCAG GCGGGCGGAT CGTCAACATC
TCCTCGATCA ACGCCTTTCT CGGTATGCCA CAGTCCAGCC ACTACAACTC GGCAAAAGGC
GCGATTGATC AGCTAACGCG CTGCCTGGCG GTCGAACTTG CGCCGCACGG CATTCTGGTC
AATGGTGTAG CGCCGGGGTT CGTCGAAACG CCTATGGCAA TCGTCAATGG CATCAACGAA
CACGAAACGC CAGAGTTTCA GGAGTTCTAT GTGCGTCGGC GGCGCATCCC GCTGGCGCGC
CCCGCACTCC CCGCAGAGAT CGCCGAAGCA GTGGCGTTCC TTGTTTCACC ACGCTGCACC
TACATCACCG GGCACACACT GGTTGTCGAC GGCGGGTTGT CGATCACGTT CTGA
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| Protein sequence | MSDILAGKVA LITGAASGIG RATALTLARE GAAVVVADID APRGAETVAT IGAAGGRAHF
VQADVIRDAE RMVEAAMQEF GRLDILVNNA GIFYTVDLLD VTFDEWVRAV DVMYFGTFRC
SQAAARQMVH QGAGGRIVNI SSINAFLGMP QSSHYNSAKG AIDQLTRCLA VELAPHGILV
NGVAPGFVET PMAIVNGINE HETPEFQEFY VRRRRIPLAR PALPAEIAEA VAFLVSPRCT
YITGHTLVVD GGLSITF
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