Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1302 |
Symbol | tgt |
ID | 5208254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1604515 |
End bp | 1605717 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640594917 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001275656 |
Protein GI | 148655451 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGG CATTCGATAT CGAAGCGCGC GATCCGCATA GTCGCGCCCG CGCAGGGCGC ATCACCACTG CCCATGGAGT GATCGAGACG CCGGTTTTTA TGCCGGTTGG CACGCGGGGA TCGATAAAAT CGCTGACACC CGATGAAGTG CGCAATCACG GCGCACAGAT TATCCTTGGC AATACCTATC ATCTCTACTT GCAACCCGGT CACGAATTGA TTGCCCGTAT GGGTGGATTG CACCACTTTA TGGGGTGGGA CGGTCCTATT CTGACCGATA GTGGCGGATT TCAGGTGTTT AGCCTGGTGT ATGGCGGTAT TGCCGATGAG ATCAAAGGTC GGCGACCGAC GCAACAGGTT CAGCCTGGTA TGGTTAAAGT CACCGATGAT GCCGTGATTT TCAAATCGTA TATCGATGGT TCCATGCATG TGTTTACGCC TGAACGCAGT ATCGAGATTC AGAAAGGCAT TGGCGCTGAT ATTATCCTTT GCTTTGATGA GTTGCCGCCG TTTCACGCCG GCTACGATTA TACGGCGCGT TCGCTGGAAC GCACCCACGC CTGGGAGCGA CGCTGTCTGA TGTTCCACCG GGCGACGCAG GAAGGCGGGT TGCCGTTCGT GCCGCCGAAT CCGTATCAGG CGTTGTTCGG CATCGTTCAT GGCGGGGTCT TTCCCGATCT GCGACGGGCA AGCGCCGAGT ATCTGCGCGA ATTGCCGTTC GATGGGTTAT GTATTGGCGG GTCGCTCGGC GAAAACAAAC AGCAGATGCG CGAGGTGGTG GATATGACCG TGCCGCATAT GCCTGATCAT CTACCGCGCC ATCTGTTAGG TATTGGTGAT GTGGACGACC TGATCGAATG CGTGGCGCGC GGGATCGATA TGTTTGATTG CGTCAGCCCA ACGCGCCTTG GTCGCCATGG CACGGCGCTG GTGCGCGATG CGGAACGTCG CTGGAAATTG AATGTCGCCA ATGCTGCGCT GCGCGACGAC CCGACCCCGC TGGATGCCTG GTGTGACTGC TATACGTGCC GCCGCTATTC GCGCGCCTAT ATTCACCACC TGTTCCGTGC GCAGGAACTG CTCGGCATTC GACTGGTCAG CCTGCACAAT GTCGCGTTCC TGCTCAAATT GATGCGCACC ATCCGGCAGA GTATTATCGA AGGTCGTTTT GCGCATCTAC GGGCGGAGTG GCTGGGGATC TGA
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Protein sequence | MTLAFDIEAR DPHSRARAGR ITTAHGVIET PVFMPVGTRG SIKSLTPDEV RNHGAQIILG NTYHLYLQPG HELIARMGGL HHFMGWDGPI LTDSGGFQVF SLVYGGIADE IKGRRPTQQV QPGMVKVTDD AVIFKSYIDG SMHVFTPERS IEIQKGIGAD IILCFDELPP FHAGYDYTAR SLERTHAWER RCLMFHRATQ EGGLPFVPPN PYQALFGIVH GGVFPDLRRA SAEYLRELPF DGLCIGGSLG ENKQQMREVV DMTVPHMPDH LPRHLLGIGD VDDLIECVAR GIDMFDCVSP TRLGRHGTAL VRDAERRWKL NVANAALRDD PTPLDAWCDC YTCRRYSRAY IHHLFRAQEL LGIRLVSLHN VAFLLKLMRT IRQSIIEGRF AHLRAEWLGI
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