| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1275 |
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| Symbol | |
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| ID | 5208227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1578682 |
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| End bp | 1579665 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640594890 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001275629 |
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| Protein GI | 148655424 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATTG TCGCAGATCC GACACAACTG ATTGCACCGG TCGGGATCTT CCTGGCGATC
CTGGCGGTGT TTGCGTTCCT GGCGAGCCGG AGCGCGAGCA ATCCCAGTTA TGAAGAGCGC
CTGACCCAGT TCGCCGGTCG GCGCGCCGAT CAGCAACAGC GCACCGCAAA AGAGCAACTG
CGCGAAATCG ATAAGGTCGT AGCGCGCGGC AAGCGCGGCA GCGAGACGGC GCGCAATCTG
GCGCGCGCCG ACTTGAAACT GACGGTGACC GAGTTCTACA TGATCAAACT CCTCGCCGCT
GGCGTCGGCG CGGTGGTTGG CGCGTTCATC GGGCGCGCCA GTTGGGAAGC TCAGTTGCTG
TCCGGGATTG TCGGTTTCGC ACTCTTCTCG TTCCTCCCCG ATCTGTATGT GGGGTATGCT
GCAAAACAGC GCGTGACCAA ATTCAATGCT CAACTCGGCG ATACGATCAA TATGCTGGCG
AACTCGCTGC GTTCGGGGTA CAGCCTGCTG CAATCGATGG AACTGGTCAG TCGTGAGGCA
CCCGAACCAA CTGCGTCCGA GTACCGGCGC GTGGTGCAGG AGGTCGGTCT GGGGTTGCGC
ACCGAAGATG CGCTCGACAA TCTGCTCAAG CGTGTGCCGT CGGAAGACCT CGACCTGCTG
ATTACCGCAG TCAAAATTCA GATGGAATCA GGCGGCAATC TGGCGCAGAT ACTCGATACT
ATCGGTCATA CGATTCGTGA ACGCATCCGT ATCAAGGGCG AGATCGCGGT GCTGACCGCG
CAGGGGCGGA TTTCCGCTTA TGTGATTACG GGCCTGCCGA TCGGTCTGGC AATTTTTATC
ACGGTGATCA ACCCGAACTA TATGGCGCCG ATGTTTTCGT TCGGTATGCC GCCGGAGCAC
TGGTGCTGTC TGCCGGTTGC TGGCATTGTG ATGATTGTGA TCGGTTTTTT TGCGATTATG
AAGATTGTGG ATATCGAGGT GTAG
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| Protein sequence | MPIVADPTQL IAPVGIFLAI LAVFAFLASR SASNPSYEER LTQFAGRRAD QQQRTAKEQL
REIDKVVARG KRGSETARNL ARADLKLTVT EFYMIKLLAA GVGAVVGAFI GRASWEAQLL
SGIVGFALFS FLPDLYVGYA AKQRVTKFNA QLGDTINMLA NSLRSGYSLL QSMELVSREA
PEPTASEYRR VVQEVGLGLR TEDALDNLLK RVPSEDLDLL ITAVKIQMES GGNLAQILDT
IGHTIRERIR IKGEIAVLTA QGRISAYVIT GLPIGLAIFI TVINPNYMAP MFSFGMPPEH
WCCLPVAGIV MIVIGFFAIM KIVDIEV
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