| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1268 |
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| Symbol | |
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| ID | 5208220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1565566 |
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| End bp | 1567302 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640594884 |
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| Product | PA14 domain-containing protein |
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| Protein accession | YP_001275623 |
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| Protein GI | 148655418 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.29777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAC GATTTCAATC AGGACAGGCG CTCGTCGAGT TTGTTATCGC CTCGACGCTT
ATCCTGCTGC TGCTGGCGGC TGCGGTCGAT ATCGGGCTGC TGTTCTTCAA CATGCAGGGG
TTGACCACCG CTGCGCAGGA AGGCGCCACG TATGGCAGTC GTTATGTGAT CGTCCGATCG
GATGGCGCGG TCGATCTCGA TTACGACATG ATCCGCACAC GCGTGCGCCA GGAAGCAGGA
ACGACCGGCG GCATCAACTT CGTCAATATG TACGATCTTA ACAGTGATGC CATTCCCGAC
GCCGCCGACA CCAACGGCGA CGGCGTGCTC GACCAGTTCC AGTACTTCCT CGACCAGAAC
GGCGACGGGC GCGCAATCGG CGATCCGGTG ACCGGGCTGA TCCCCGCAGG AACCGAACCG
TCCGGCTACG TCCGGTTGAT CGATCACTAC ATCCTGGTGC AAGCGATCGA GGATGTCTTC
CCGTTCAACG GCAATCCGCT GGGACCGGAG GACGCCGACG GCAATCGCGC CAACGACCTG
GCGCCCGACG TGGATACAAC GCCCTGCGCC AACCTGGCGG ATCCGAACCG GCAGTGCTAT
GTCTTCGTCA TTGTGAAATC CGACTACAAT ACCGTGTTTG GCTTCACGCC CGCCTTTGGC
GATAAGGTGC CGCTCAGTTC GCGCTTTGTC ATGCCGCTGC GCGCCGGTTT TGTCTCGCCG
GGCGCGCCGA CCAATCCGCC GGTGGTGCAA ACCAATACGC CAACACCCAC GCCGACGAAT
ACGCCGACGC CAACCGCAAC CAACACGCCA ACGCGCACAC CGACGAATAC GGCATCGCCG
ACAACGACGA ATACGCCGAC CAATACGCGC ACGCCAACCA ATACGCCAAC GCGCACCAAT
ACGCCGACAC GCACCAATAC GCCAACACCG AGTAATACGC CGACGCGCAC TCCCACATTC
ACGCCGACCG CCACGCCATG CGCTGGCGGC ACAGGCAACG GTCTGCGTGG CGACTACTTC
ATCTACACGC CGGGCAGCAG TGTGGGAACG ACGAACTTCT TCCCCGGCGC ACCGGTGGCG
AGCCGCACCG AAAATATCAA CATGGCGCAG AACAATAACT CGCCCATTAC TGGCGTAGGA
AATAATTACT TCTCCGTGCG CTGGACGGGT CAGGTTGAGC CGCTGTTCAG CGGGGAGTAT
ACCTTCTTCG CCGATACTGA TGATGGTGTG CGCGTGTGGG TCAACGGCGT CCAGATCATC
AATGACTGGC GCACCAAGTC TGGTGAAGCG AATGGCAGGA TCACCCTGAC CGCCTGCCAG
CGGGTCAGCA TTACGGTTGA GTACTTCGAG TGGACCGGCA ACCAGCGCGC GATCCTCAGC
TGGTCGCATG CGAACCAGCC GAAGCAGGTC ATTCCGGTTG CGCGGCTCTA CTCCAGCGGC
GCGCCGCCGG CAACGGCGAC CCGTACGCTG ACGCCGTCGC GCACGCCGAC GTTCACGCCG
AGCAACACGC CAAGGCCGAC CAACACGCCG ACGCCGAGCA ACACGCCGAG GCCGACCAAC
ACGCCGACGC GCACCAATAC GCCGACCAAT ACGCCACCGG CGACCAATAC GCCGACGCGC
ACGCCAACGT TCACGCCGAC GCGCACGCCG ACGTTCACAC CGTCGCTGAC GCCGTCGAAC
ACGCCGACGC GCACGCCAAC GTTCACGCCG ACGCGCACGC CGGACACCGG TACGTAA
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| Protein sequence | MARRFQSGQA LVEFVIASTL ILLLLAAAVD IGLLFFNMQG LTTAAQEGAT YGSRYVIVRS
DGAVDLDYDM IRTRVRQEAG TTGGINFVNM YDLNSDAIPD AADTNGDGVL DQFQYFLDQN
GDGRAIGDPV TGLIPAGTEP SGYVRLIDHY ILVQAIEDVF PFNGNPLGPE DADGNRANDL
APDVDTTPCA NLADPNRQCY VFVIVKSDYN TVFGFTPAFG DKVPLSSRFV MPLRAGFVSP
GAPTNPPVVQ TNTPTPTPTN TPTPTATNTP TRTPTNTASP TTTNTPTNTR TPTNTPTRTN
TPTRTNTPTP SNTPTRTPTF TPTATPCAGG TGNGLRGDYF IYTPGSSVGT TNFFPGAPVA
SRTENINMAQ NNNSPITGVG NNYFSVRWTG QVEPLFSGEY TFFADTDDGV RVWVNGVQII
NDWRTKSGEA NGRITLTACQ RVSITVEYFE WTGNQRAILS WSHANQPKQV IPVARLYSSG
APPATATRTL TPSRTPTFTP SNTPRPTNTP TPSNTPRPTN TPTRTNTPTN TPPATNTPTR
TPTFTPTRTP TFTPSLTPSN TPTRTPTFTP TRTPDTGT
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