Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1255 |
Symbol | |
ID | 5208207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1541491 |
End bp | 1543293 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594871 |
Product | oligoendopeptidase F |
Protein accession | YP_001275610 |
Protein GI | 148655405 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0012526 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGAAA CGCAAAAAGT GCCGCGCCGT GATGAGATTC CTGAGCATTA TCGCTGGGAT CTGACGACGA TATATGTCGA TGATGCCGCC TGGGAGCAGG ATGTCGCTAC GATCGAGCAG ATGCTGAGCG ATGTTGCCGC AGTGCAAGGA CGCGTCGCTG GCAGCCCTGA CGACCTGCTG GCGGCATTGC GACTACGCGA TCAGGTATCG ATGCGTCTCT GGCAGATCTA CGTCTACGCC AACCGTCGCT TTGATAGCGA CACAACCGAC CCGGTCGGGC AGGCGCTTGC CGAACGCGCC GGAACGCTGG CGGCGAAGGT CGGCGCGGCG CTGGCGTTTA TCGAACCGGA GATCCTGGCG GCGCCGGAGG ATCAGATCCG CGCCTGGATC CGGGAGTACC CCGATCTGGC AGTGTATGAG TACGCACTGG ATCAGTTGTT GCGCCAGCGC GCTCACGTGC GCTCTGCCGA GGTCGAAGCG ATCCTGGCGC AGTTCAGCGA TATTACACGC GCGCCGGGCG AGATTTTTGA AGTCTTGACC AATGCCGATC TGCATTTTCC ATCAATTGAG GATGAGCAGG GGCAGCCGGT GCAACTGTCG CACGGGCGTT TCCTGCGCTT CCTGCGCAGT CCTGATCGCA GGGTGCGCCG CGATGCGTTC GTCGGGTACT ATAGCGCCTT CCAGGGGATA CGCAATACGC TGGGGGCGTC GCTTGCCGCG CAGGTGCGCA CCCACGTGCT GAATGCGAAG GTTCGCAATT ATGCGTCATC ACTGGAGGCG GCGCTGACGC CGAACGACAT TCCGGTGGAG GTTTACCATA ACCTGATTGC GACGGTCAAC GCCAGCCTGC CCCGTCTCCA CCGCTATTTC CAGGCGCGCC GGAAGATCAT GGGGCTGGAT GAACTGCACT TCTACGATCT GTACGCCCCG CTCGTTCCAG AAGCAGATGT TGCGGTTCCG TATGAAGAAG CGGAACGCAT GGTGCGTGCG GCATTCGAGC CGCTCGGCGA TGAGTATGGC GCTGCCGTTG CGCAGGCGTT CCGCAGTCGC TGGATCGATG TCTACGAGAA TATCGGCAAG CGCAGCGGCG CATACAGCGA CGGTTCGTAC ACCACTGCGC CGTTCATGCT GCTGAATTAC CAGGAACGCC TGAACGACGT GTTTACGCTG GCGCACGAAC TCGGTCATGC AATGCACTCG TACTTCACGC GCAAGACGCA GCCCTACATT TATGGCGACT ACACCATCTT TGTCGCTGAA GTCGCTTCCA CGCTGAACGA GGCGCTGTTG ACCGATCACC TGTTGCGAAC GCGCGATGAC CCGATCCTGC GCCGCTATCT GATTGTCGAG CAACTGGAAG ATATTCGCAC CACACTCTTC CGACAGACCA TGTTCGCCGA GTTTGAACTG GAAATCCATC GTCGGGCGGA GACAGGAGAG CCGCTGACGA CCGAACTGTT CAGCACGATC TACCGCGATC TGGTGGCGCG TTACCACGGG TCGGAAGTGG CGCTCGACGA GCAGATCGCG CTGGAATGGG CGCGTATTCC GCATTTCTAC TACAATTTTT ATGTCTACCA GTATGCAACC GGGCTTTCGG CGGCGCTGGC GCTGCACAAA CGGATCGTTC AGGAAGGAAG TCCAGCTATC GAGCGGTATC TGCATTTCCT GCGCAGCGGA TCGTCGCGCC CTTCGATTGA ACTGTTGCGC GATGCCGGGG TTGATATGCT CTCGCCAGCG CCGATCCAGG CGGCGATGGA TCACTTCAGC GCATTGCTCG ATGAACTGGA GCGGATGACA TAG
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Protein sequence | MTETQKVPRR DEIPEHYRWD LTTIYVDDAA WEQDVATIEQ MLSDVAAVQG RVAGSPDDLL AALRLRDQVS MRLWQIYVYA NRRFDSDTTD PVGQALAERA GTLAAKVGAA LAFIEPEILA APEDQIRAWI REYPDLAVYE YALDQLLRQR AHVRSAEVEA ILAQFSDITR APGEIFEVLT NADLHFPSIE DEQGQPVQLS HGRFLRFLRS PDRRVRRDAF VGYYSAFQGI RNTLGASLAA QVRTHVLNAK VRNYASSLEA ALTPNDIPVE VYHNLIATVN ASLPRLHRYF QARRKIMGLD ELHFYDLYAP LVPEADVAVP YEEAERMVRA AFEPLGDEYG AAVAQAFRSR WIDVYENIGK RSGAYSDGSY TTAPFMLLNY QERLNDVFTL AHELGHAMHS YFTRKTQPYI YGDYTIFVAE VASTLNEALL TDHLLRTRDD PILRRYLIVE QLEDIRTTLF RQTMFAEFEL EIHRRAETGE PLTTELFSTI YRDLVARYHG SEVALDEQIA LEWARIPHFY YNFYVYQYAT GLSAALALHK RIVQEGSPAI ERYLHFLRSG SSRPSIELLR DAGVDMLSPA PIQAAMDHFS ALLDELERMT
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