Gene RoseRS_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1252 
SymboltrpC 
ID5208204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1538628 
End bp1539437 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID640594868 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_001275607 
Protein GI148655402 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.157221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACAA TACTCAACCG CATTCTGACC CACAAGCGTG TTGAAGTCGA GCGACAGCGC 
ATCAAGATAC CCGACGCACA GATCCGCGCG CGGGCAGAAG CGGCGCCGCC GCCACGCGAC
TTCGCCGCTG CGCTGCGTGC ACATCGCCCC ATCGCGCTGA TCGCCGAGGT CAAGAAAGCA
TCGCCGTCGA AAGGCGTCCT GATCGAGAAC TTCGATCCGC TGGCGCTGGC GCATACCTAT
GCCAGCAACG GTGCATCCGC CATTTCGGTG CTCACCGATG TGCGCTTCTT CCAGGGCAGC
CTGAAGCATC TGGAAGGAAT TCGCGCCATG GTCGATCGGG GAGCGGTGCC GCCATTGCCG
CTCCTCCGCA AGGATTTCAT CATCGACCCG TATCAGGTCG CAGAGGCGCG CGCGTATGGC
GCCGATGCGC TGCTCCTGAT CGTCGCCGCG CTCGACGACG AGACGCTGGC GGCGCTGCTG
GCGCTGACCC ACTCCTTCGG CATGCAGGCG CTGGTCGAGG TGCATAACGA AGACGAACTC
CGGCGCGCTC TGGATGCCGG TGCATCCATT ATCGGCGTCA ACAACCGTGA CCTGCACAGT
TTTACGACGA CCCTGGAGAC GACCCGCCGC CTGGCTGCGT TGCTGCCATC ATCGAATCGT
CCGCTGCTGG TCAGCGAGAG CGGCATTTTT ACCGCCGAAC ACGTCGCACT GGTGCGCTCG
TGGGGCGCCG ATGCAATCCT GGTCGGTGAA GCGCTGGTCA CTGCCCCCGA TATTTCCAGT
AAAGTGCGCG AACTGGGAGG AGGCTCATGA
 
Protein sequence
MDTILNRILT HKRVEVERQR IKIPDAQIRA RAEAAPPPRD FAAALRAHRP IALIAEVKKA 
SPSKGVLIEN FDPLALAHTY ASNGASAISV LTDVRFFQGS LKHLEGIRAM VDRGAVPPLP
LLRKDFIIDP YQVAEARAYG ADALLLIVAA LDDETLAALL ALTHSFGMQA LVEVHNEDEL
RRALDAGASI IGVNNRDLHS FTTTLETTRR LAALLPSSNR PLLVSESGIF TAEHVALVRS
WGADAILVGE ALVTAPDISS KVRELGGGS