Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1252 |
Symbol | trpC |
ID | 5208204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1538628 |
End bp | 1539437 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640594868 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_001275607 |
Protein GI | 148655402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.157221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAA TACTCAACCG CATTCTGACC CACAAGCGTG TTGAAGTCGA GCGACAGCGC ATCAAGATAC CCGACGCACA GATCCGCGCG CGGGCAGAAG CGGCGCCGCC GCCACGCGAC TTCGCCGCTG CGCTGCGTGC ACATCGCCCC ATCGCGCTGA TCGCCGAGGT CAAGAAAGCA TCGCCGTCGA AAGGCGTCCT GATCGAGAAC TTCGATCCGC TGGCGCTGGC GCATACCTAT GCCAGCAACG GTGCATCCGC CATTTCGGTG CTCACCGATG TGCGCTTCTT CCAGGGCAGC CTGAAGCATC TGGAAGGAAT TCGCGCCATG GTCGATCGGG GAGCGGTGCC GCCATTGCCG CTCCTCCGCA AGGATTTCAT CATCGACCCG TATCAGGTCG CAGAGGCGCG CGCGTATGGC GCCGATGCGC TGCTCCTGAT CGTCGCCGCG CTCGACGACG AGACGCTGGC GGCGCTGCTG GCGCTGACCC ACTCCTTCGG CATGCAGGCG CTGGTCGAGG TGCATAACGA AGACGAACTC CGGCGCGCTC TGGATGCCGG TGCATCCATT ATCGGCGTCA ACAACCGTGA CCTGCACAGT TTTACGACGA CCCTGGAGAC GACCCGCCGC CTGGCTGCGT TGCTGCCATC ATCGAATCGT CCGCTGCTGG TCAGCGAGAG CGGCATTTTT ACCGCCGAAC ACGTCGCACT GGTGCGCTCG TGGGGCGCCG ATGCAATCCT GGTCGGTGAA GCGCTGGTCA CTGCCCCCGA TATTTCCAGT AAAGTGCGCG AACTGGGAGG AGGCTCATGA
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Protein sequence | MDTILNRILT HKRVEVERQR IKIPDAQIRA RAEAAPPPRD FAAALRAHRP IALIAEVKKA SPSKGVLIEN FDPLALAHTY ASNGASAISV LTDVRFFQGS LKHLEGIRAM VDRGAVPPLP LLRKDFIIDP YQVAEARAYG ADALLLIVAA LDDETLAALL ALTHSFGMQA LVEVHNEDEL RRALDAGASI IGVNNRDLHS FTTTLETTRR LAALLPSSNR PLLVSESGIF TAEHVALVRS WGADAILVGE ALVTAPDISS KVRELGGGS
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