Gene RoseRS_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1251 
Symbol 
ID5208203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1537081 
End bp1538532 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content63% 
IMG OID640594867 
Productpeptidase S41 
Protein accessionYP_001275606 
Protein GI148655401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID[TIGR00225] C-terminal peptidase (prc) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.320034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC GCTTCCGCTC AACCCTGATT GCGCTGATCG CCGGTGTGCT GGCGGGGTGC 
GGCGCTTTCC CTGTGGCGCT GCGACCAGAT CCGACTGCAC CTGTCGTTCC GCTTTCGACG
CCGACAGAGT TGCCAGCCGC CACATCGACG GCAACGCCGC CATTGCCAAC CGCGACACCG
ACGCCAACCC ATACCCCTAC GCCGATTCCA ACGCCAACCG TTACCCCTTA CCCGCTCCTG
CCGACTCCGA CACTCGCACC GCTGACTGCC AGCATGCGCC AGGAGATCTT CAACGATGTC
TGGACGCTGG TGCGCGACCG GTATGTGTAC GAGGATTACG GCGGCATCGA CTGGGACGCA
GTACGCGAAG AGTTCGAGCC ATTGATTGCC AGGGCTGCGT CGGAAGAAGA GTTCTATGCG
CTGATCGAGC AAATGGTGGC TCGTCTCGGC GATGATCATA CACGCTTCGA CACGCCGCAG
GAAGTAGCCG AAGAGGCAGC CCGTTTCGAT GGCGGGGTGG CATATGCTGG CATTGGCGCG
ATGATCCGCG AACTGCCAGA GGGTATTCTG ATCACCCGTC TCGCCCCCAA CAGTCCGGCG
GAACAGGCAG GATTGCAACC GCGCGACCTG ATCGTTGCCG TCAACGGAGT GCCGGTCAGC
GACACCGTCA CCTTCGGTCC CGGCGGTCCG ATCACGGTGG TGCGCGGGCA ACCGGGAACA
CCTGTGCAAC TCAGGGTGCG CAGCAGCGCT GGCGCAGTGC GCGAAGTGAC CGTCATCCGC
CAGGTTATTC CGCCCGACGC CTTCCCGATT GTCGAGGCGC GCCGTCTGCC AGGAACCGAC
GTTGGCGTGG TTCTGATCGA TACATTCAAC ATTTCTGCTC TCGACGAGCG TGTGACCGAC
GCGATCATGT CGCTGTTTCG GTCTGGACCG CTCGATGGGT TGATCCTGGA TGTGCGCACC
AACGGCGGCG GGCGCCTGGA TATGCTCCGC CGCACGCTGG GGCTGTTTCT CGACGGCGGC
ACGATCGGCA GCAGTACCGG ACGAGACCGT TCCTTCAGCA TCGATGTGCC GTCGGGTCGC
ACCCTGCCCC TGCTCGAGCA GGTGCCAATC GTTGTGCTGA CGAGTGATGA GACCGCCAGC
GCCGCCGAGA TGTTTGCCGC CGGTCTGCAG TTCCGTGGTC GTGCGCGGAT CGTCGGTACG
CCAAGCGCTG GCAACACCGA AAACCTGATC GGATATGATC TCGACGATGG CTCACGTTTC
TGGGTGGCGG AACTGGTCTT TCGCCTGCCC GACGGCTCAT TGCTCGAAGG AACAGGCGTT
CAGCCCGACC GGGTAGTGGA AGCGGAATGG TGGCGCTACG ACGACGAAAA CGACCCGCAA
ATCCTTGCAG CGGTCGAAGA ACTCCGCCTC GCCAACCGAT CCCGTTATGC CGCAGATACG
GTTGAACGTT GA
 
Protein sequence
MKIRFRSTLI ALIAGVLAGC GAFPVALRPD PTAPVVPLST PTELPAATST ATPPLPTATP 
TPTHTPTPIP TPTVTPYPLL PTPTLAPLTA SMRQEIFNDV WTLVRDRYVY EDYGGIDWDA
VREEFEPLIA RAASEEEFYA LIEQMVARLG DDHTRFDTPQ EVAEEAARFD GGVAYAGIGA
MIRELPEGIL ITRLAPNSPA EQAGLQPRDL IVAVNGVPVS DTVTFGPGGP ITVVRGQPGT
PVQLRVRSSA GAVREVTVIR QVIPPDAFPI VEARRLPGTD VGVVLIDTFN ISALDERVTD
AIMSLFRSGP LDGLILDVRT NGGGRLDMLR RTLGLFLDGG TIGSSTGRDR SFSIDVPSGR
TLPLLEQVPI VVLTSDETAS AAEMFAAGLQ FRGRARIVGT PSAGNTENLI GYDLDDGSRF
WVAELVFRLP DGSLLEGTGV QPDRVVEAEW WRYDDENDPQ ILAAVEELRL ANRSRYAADT
VER