Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1251 |
Symbol | |
ID | 5208203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1537081 |
End bp | 1538532 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640594867 |
Product | peptidase S41 |
Protein accession | YP_001275606 |
Protein GI | 148655401 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.320034 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTC GCTTCCGCTC AACCCTGATT GCGCTGATCG CCGGTGTGCT GGCGGGGTGC GGCGCTTTCC CTGTGGCGCT GCGACCAGAT CCGACTGCAC CTGTCGTTCC GCTTTCGACG CCGACAGAGT TGCCAGCCGC CACATCGACG GCAACGCCGC CATTGCCAAC CGCGACACCG ACGCCAACCC ATACCCCTAC GCCGATTCCA ACGCCAACCG TTACCCCTTA CCCGCTCCTG CCGACTCCGA CACTCGCACC GCTGACTGCC AGCATGCGCC AGGAGATCTT CAACGATGTC TGGACGCTGG TGCGCGACCG GTATGTGTAC GAGGATTACG GCGGCATCGA CTGGGACGCA GTACGCGAAG AGTTCGAGCC ATTGATTGCC AGGGCTGCGT CGGAAGAAGA GTTCTATGCG CTGATCGAGC AAATGGTGGC TCGTCTCGGC GATGATCATA CACGCTTCGA CACGCCGCAG GAAGTAGCCG AAGAGGCAGC CCGTTTCGAT GGCGGGGTGG CATATGCTGG CATTGGCGCG ATGATCCGCG AACTGCCAGA GGGTATTCTG ATCACCCGTC TCGCCCCCAA CAGTCCGGCG GAACAGGCAG GATTGCAACC GCGCGACCTG ATCGTTGCCG TCAACGGAGT GCCGGTCAGC GACACCGTCA CCTTCGGTCC CGGCGGTCCG ATCACGGTGG TGCGCGGGCA ACCGGGAACA CCTGTGCAAC TCAGGGTGCG CAGCAGCGCT GGCGCAGTGC GCGAAGTGAC CGTCATCCGC CAGGTTATTC CGCCCGACGC CTTCCCGATT GTCGAGGCGC GCCGTCTGCC AGGAACCGAC GTTGGCGTGG TTCTGATCGA TACATTCAAC ATTTCTGCTC TCGACGAGCG TGTGACCGAC GCGATCATGT CGCTGTTTCG GTCTGGACCG CTCGATGGGT TGATCCTGGA TGTGCGCACC AACGGCGGCG GGCGCCTGGA TATGCTCCGC CGCACGCTGG GGCTGTTTCT CGACGGCGGC ACGATCGGCA GCAGTACCGG ACGAGACCGT TCCTTCAGCA TCGATGTGCC GTCGGGTCGC ACCCTGCCCC TGCTCGAGCA GGTGCCAATC GTTGTGCTGA CGAGTGATGA GACCGCCAGC GCCGCCGAGA TGTTTGCCGC CGGTCTGCAG TTCCGTGGTC GTGCGCGGAT CGTCGGTACG CCAAGCGCTG GCAACACCGA AAACCTGATC GGATATGATC TCGACGATGG CTCACGTTTC TGGGTGGCGG AACTGGTCTT TCGCCTGCCC GACGGCTCAT TGCTCGAAGG AACAGGCGTT CAGCCCGACC GGGTAGTGGA AGCGGAATGG TGGCGCTACG ACGACGAAAA CGACCCGCAA ATCCTTGCAG CGGTCGAAGA ACTCCGCCTC GCCAACCGAT CCCGTTATGC CGCAGATACG GTTGAACGTT GA
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Protein sequence | MKIRFRSTLI ALIAGVLAGC GAFPVALRPD PTAPVVPLST PTELPAATST ATPPLPTATP TPTHTPTPIP TPTVTPYPLL PTPTLAPLTA SMRQEIFNDV WTLVRDRYVY EDYGGIDWDA VREEFEPLIA RAASEEEFYA LIEQMVARLG DDHTRFDTPQ EVAEEAARFD GGVAYAGIGA MIRELPEGIL ITRLAPNSPA EQAGLQPRDL IVAVNGVPVS DTVTFGPGGP ITVVRGQPGT PVQLRVRSSA GAVREVTVIR QVIPPDAFPI VEARRLPGTD VGVVLIDTFN ISALDERVTD AIMSLFRSGP LDGLILDVRT NGGGRLDMLR RTLGLFLDGG TIGSSTGRDR SFSIDVPSGR TLPLLEQVPI VVLTSDETAS AAEMFAAGLQ FRGRARIVGT PSAGNTENLI GYDLDDGSRF WVAELVFRLP DGSLLEGTGV QPDRVVEAEW WRYDDENDPQ ILAAVEELRL ANRSRYAADT VER
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