| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1215 |
|---|
| Symbol | |
|---|
| ID | 5208167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1493558 |
|---|
| End bp | 1494244 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640594833 |
|---|
| Product | haloacid dehalogenase superfamily protein |
|---|
| Protein accession | YP_001275572 |
|---|
| Protein GI | 148655367 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2178] Predicted RNA-binding protein of the translin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA TCGAAACCGT TGTTGCTGCT GCTGTCGCGC AGATCGAAGC GAGCCATACC
GCGCGTGAAC AGGCGCTCAC CCTGGCGCGC GCGCTGACGC GCCAGTGCGC CAACGCCATT
CGTGCCGTCC ATCGCCGGGA ATTCACTGAA GCCGCCGCGT TGCTGGCGGA AGCCAGCGCG
TCAGCGCGCG CGCTGCGCGA AAGCCTCGCC GACCATCCCG ATCTCCTGTA TGCTGGCTAT
TCCCAGGACG CGCTCAAGGA GTATGCCGAA GCCGCGCTGG TGTATGCCTT CCTCCACGGC
GACCCGCCGC CCGATGCGGC GTCGCTCGGA GTCGATGCTG CGGCGTACCT CAATGGTCTG
GCTGAAGCGG CTTCGGAATT GCGCCGTGCT ATTCTCGATA GCATGCGCGC TGGCGCGACT
GCGCACGGCG TGGCGCTGCT GGCAATTATG GACGATATCT ATAGCCTGCT CATCACGATC
GACTACCCGG AGGCCGTGAC CGGCGGCTTG CGCCGCACGA CCGATGCGCT GCGCGCAGTG
CTCGAACGCA CCCGCGGCGA TGTCACTGCC GCGATCCGTC AGGATCACCT GATCGCAGCA
CTCGAAGCGT TTGAACAACG CCTTGATCGC CTGCAAGCTG CAACACTGCC ACGGAATACG
CCGCTCGAAC AATCCGACGG GGGATAA
|
|---|
| Protein sequence | MNAIETVVAA AVAQIEASHT AREQALTLAR ALTRQCANAI RAVHRREFTE AAALLAEASA
SARALRESLA DHPDLLYAGY SQDALKEYAE AALVYAFLHG DPPPDAASLG VDAAAYLNGL
AEAASELRRA ILDSMRAGAT AHGVALLAIM DDIYSLLITI DYPEAVTGGL RRTTDALRAV
LERTRGDVTA AIRQDHLIAA LEAFEQRLDR LQAATLPRNT PLEQSDGG
|
|---|
| |