| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1186 |
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| Symbol | rpsJ |
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| ID | 5208137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1455521 |
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| End bp | 1455829 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640594803 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001275543 |
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| Protein GI | 148655338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.376062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAAAC AAAAGGTTCG CATCCGTCTC AAGGCATACG ACCATAAGAT TCTCGACCAA
TCGGCGCGAC AGATCGTCGA AGCAGCCGAA CGCACCGGAG CGCTCGTCGC CGGTCCGGTG
CCGTTGCCGA CCAAAATCGA AAAGCATAGC GTCATTCGTT CGCCGTTTAT TGATAAAGAC
TCGCAGGAAC AGTTTGAGAT TCGCACCCAC AAGCGATTGA TCGATGTGCT CGATCCGAGC
CAGCAGACCA TCAACGCGCT GATGAAACTC AACCTTCCGG CGGGCGTGGA TATCGAAATC
AAGTTGTAA
|
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| Protein sequence | MAKQKVRIRL KAYDHKILDQ SARQIVEAAE RTGALVAGPV PLPTKIEKHS VIRSPFIDKD
SQEQFEIRTH KRLIDVLDPS QQTINALMKL NLPAGVDIEI KL
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