Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1179 |
Symbol | |
ID | 5208130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1451455 |
End bp | 1452243 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640594796 |
Product | ribosomal protein S3 |
Protein accession | YP_001275536 |
Protein GI | 148655331 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.484191 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.192694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGGA AAGTGCACCC GATCGGCTTC CGCCTTGGGT ATATCAAGGA CTGGCAGTCG AAGTGGTTCG CGGAGCGCAA CTATACCGAA CTGCTCCACG AAGACGTCAT GCTGCGCAAG ATCATTGCCA AAGAGCTTGA GAATGCGGGT GTGGCGCGGA TCGAGATCGA GCGCTCAGCG AATAAAGTCG AGGTGACGGT CTATACAGCC AAGCCAGGCA TCGTCATCGG CAAACGCGGC GCGAAAGTCG ATGAACTGCG GGCTGAACTG GAGAAACGGA CCGGTAAGAA AGTCAAACTC AATATTCAGG AGATCCATCA ACCAGAACTT GAGGCGCAAC TAGTCGCCGA GAGCATTGCT GAACAGATCA ACAAGCGCGT CTCGTACAAG CGCGCGATGA AACAGGCCGT GCAGCGCGCG ATGCGCCTGG GCGCCCAGGG GGTGAAGATT AAGTGTTCGG GACGACTGGC GGGCGCCGAG ATGGCGCGCG TCGCCTGGGA ACGCGATGGA CGGGTTCCGC TCCATACGCT GCGCGCCGAT ATCGACTACG CACAGGTGCA TGCGCACACA ACGTATGGTC GGATTGGCGT GAAGGTGTGG ATCTATAAGG GTGAGGTCTT CCCCGATCAG AAGGGGCAGA CGCAACTACC GCAACCGGCA GTCGCCGCCG CACGTCCAGG TCTGACGGTT GAGGAAGAAG AACGGCCACA GCGCAAAGGC GGGCGTGGCG GACGCGGCGC GAACGCTGGC GCAGCGCGCG GCGGGCGTGG CGGACGGTCA CGCAGCTGA
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Protein sequence | MGRKVHPIGF RLGYIKDWQS KWFAERNYTE LLHEDVMLRK IIAKELENAG VARIEIERSA NKVEVTVYTA KPGIVIGKRG AKVDELRAEL EKRTGKKVKL NIQEIHQPEL EAQLVAESIA EQINKRVSYK RAMKQAVQRA MRLGAQGVKI KCSGRLAGAE MARVAWERDG RVPLHTLRAD IDYAQVHAHT TYGRIGVKVW IYKGEVFPDQ KGQTQLPQPA VAAARPGLTV EEEERPQRKG GRGGRGANAG AARGGRGGRS RS
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