Gene RoseRS_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1179 
Symbol 
ID5208130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1451455 
End bp1452243 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID640594796 
Productribosomal protein S3 
Protein accessionYP_001275536 
Protein GI148655331 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.484191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.192694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGGA AAGTGCACCC GATCGGCTTC CGCCTTGGGT ATATCAAGGA CTGGCAGTCG 
AAGTGGTTCG CGGAGCGCAA CTATACCGAA CTGCTCCACG AAGACGTCAT GCTGCGCAAG
ATCATTGCCA AAGAGCTTGA GAATGCGGGT GTGGCGCGGA TCGAGATCGA GCGCTCAGCG
AATAAAGTCG AGGTGACGGT CTATACAGCC AAGCCAGGCA TCGTCATCGG CAAACGCGGC
GCGAAAGTCG ATGAACTGCG GGCTGAACTG GAGAAACGGA CCGGTAAGAA AGTCAAACTC
AATATTCAGG AGATCCATCA ACCAGAACTT GAGGCGCAAC TAGTCGCCGA GAGCATTGCT
GAACAGATCA ACAAGCGCGT CTCGTACAAG CGCGCGATGA AACAGGCCGT GCAGCGCGCG
ATGCGCCTGG GCGCCCAGGG GGTGAAGATT AAGTGTTCGG GACGACTGGC GGGCGCCGAG
ATGGCGCGCG TCGCCTGGGA ACGCGATGGA CGGGTTCCGC TCCATACGCT GCGCGCCGAT
ATCGACTACG CACAGGTGCA TGCGCACACA ACGTATGGTC GGATTGGCGT GAAGGTGTGG
ATCTATAAGG GTGAGGTCTT CCCCGATCAG AAGGGGCAGA CGCAACTACC GCAACCGGCA
GTCGCCGCCG CACGTCCAGG TCTGACGGTT GAGGAAGAAG AACGGCCACA GCGCAAAGGC
GGGCGTGGCG GACGCGGCGC GAACGCTGGC GCAGCGCGCG GCGGGCGTGG CGGACGGTCA
CGCAGCTGA
 
Protein sequence
MGRKVHPIGF RLGYIKDWQS KWFAERNYTE LLHEDVMLRK IIAKELENAG VARIEIERSA 
NKVEVTVYTA KPGIVIGKRG AKVDELRAEL EKRTGKKVKL NIQEIHQPEL EAQLVAESIA
EQINKRVSYK RAMKQAVQRA MRLGAQGVKI KCSGRLAGAE MARVAWERDG RVPLHTLRAD
IDYAQVHAHT TYGRIGVKVW IYKGEVFPDQ KGQTQLPQPA VAAARPGLTV EEEERPQRKG
GRGGRGANAG AARGGRGGRS RS