| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1170 |
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| Symbol | rplF |
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| ID | 5208121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1447948 |
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| End bp | 1448511 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640594787 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001275527 |
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| Protein GI | 148655322 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.011794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0958603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCGTA TTGGCAAAAA ACCAATCCCG GTCCCGCGTG GCGTCGAGGT GACGATCACC
GAAGAGAACC GGGTGACTGT GAAAGGTCCG AAAGGGACAC TCTCGCAACA GTTTTCGCCG
GAAATGCTTA TCACGCATGA GAACGGCGTG ATTACAGTTG CGCGCCCCTC GGACGATAAG
CGCCACCGCG CCCTGCACGG GTTGACGCGC TCGCTCATCG CCAATATGGT GACGGGCGTG
ACCGAAGGGT ATCAGCGGAT TCTGGAGATC ACCGGCATCG GGTATCGCGC TGCACGTGAG
GGAAAAAACC TGGTCCTTCA GGTCGGATTT TCCCATCCGA TCCGTGTAAC GCCACCCGAA
GGGATTACCT TCGAGGTGCT GGAGCGCCGC AGCGCAAATG AACCACAGCA GGTGATTATA
CGAGGTATCG ATAAGCAGAA AGTTGGCGAA GAAGCGGCAA AACTGCGCGC GCTGCGCCCG
CCGGAGCCGT ACAAAGGGTA TGGCATCAAG TATCGTGATG AGCGGATTCG TCGCAAGGCG
GGCAAGGCAG GGAAAGCGCG GTAA
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| Protein sequence | MSRIGKKPIP VPRGVEVTIT EENRVTVKGP KGTLSQQFSP EMLITHENGV ITVARPSDDK
RHRALHGLTR SLIANMVTGV TEGYQRILEI TGIGYRAARE GKNLVLQVGF SHPIRVTPPE
GITFEVLERR SANEPQQVII RGIDKQKVGE EAAKLRALRP PEPYKGYGIK YRDERIRRKA
GKAGKAR
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