Gene RoseRS_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1160 
Symbol 
ID5208111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1442544 
End bp1442963 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID640594777 
Product30S ribosomal protein S11 
Protein accessionYP_001275517 
Protein GI148655312 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000271221 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0868676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC AAGCAGCAAA AGGTTCGGCC GCCGCGACCA AACGACAGCG CGGTAAACGC 
CGTGAAAAGA AGAATGTGCC GCGTGGTCAG GCGCATATCC AGAGTACGTT CAACAATACG
ATTGTCACGA TCACCGATCC AGCCGGGAAT GTGATCTGCT GGTCAAGCGC CGGACAGAAT
GGCTTCAAAG GATCCCGCAA GAGTACGCCG TATGCTGCTC AGGTGGCAGC CGAAAACGCG
GCACGCAAGG CCATGGAGAA TGGCATGCGT CAGGTTGAGG TCTTCGTGAA AGGACCGGGC
GCCGGACGCG AAGCGGCGAT CCGGTCACTG CAGGCGGCTG GCTTGCAGGT GACTGCGATT
ACCGATGTGA CGCCGATCCC GCACAATGGT TGCCGACCGC CCAAGCGCCG GCGTGTCTGA
 
Protein sequence
MAKQAAKGSA AATKRQRGKR REKKNVPRGQ AHIQSTFNNT IVTITDPAGN VICWSSAGQN 
GFKGSRKSTP YAAQVAAENA ARKAMENGMR QVEVFVKGPG AGREAAIRSL QAAGLQVTAI
TDVTPIPHNG CRPPKRRRV